Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TMEM88BA6NKF7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
TMEM88BA6NKF7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
TMEM88BA6NKF7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TMEM88BA6NKF7 RNPS1P1-201ENST00000507437 918 ntBASIC22.51■■□□□ 1.19
TMEM88BA6NKF7 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.51■■□□□ 1.19
TMEM88BA6NKF7 AC099336.1-202ENST00000602961 463 ntBASIC22.51■■□□□ 1.19
TMEM88BA6NKF7 AL691403.2-201ENST00000618460 490 ntBASIC22.51■■□□□ 1.19
TMEM88BA6NKF7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
TMEM88BA6NKF7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TMEM88BA6NKF7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TMEM88BA6NKF7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.51■■□□□ 1.19
TMEM88BA6NKF7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TMEM88BA6NKF7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TMEM88BA6NKF7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 RNF126P1-202ENST00000569893 925 ntBASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.5■■□□□ 1.19
TMEM88BA6NKF7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TMEM88BA6NKF7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TMEM88BA6NKF7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMEM88BA6NKF7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.49■■□□□ 1.19
TMEM88BA6NKF7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TMEM88BA6NKF7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC22.49■■□□□ 1.19
TMEM88BA6NKF7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.49■■□□□ 1.19
TMEM88BA6NKF7 REXO1L6P-202ENST00000619970 1078 ntBASIC22.49■■□□□ 1.19
TMEM88BA6NKF7 TP73-AS1-207ENST00000624167 988 ntBASIC22.49■■□□□ 1.19
TMEM88BA6NKF7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
TMEM88BA6NKF7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMEM88BA6NKF7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC22.49■■□□□ 1.19
TMEM88BA6NKF7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 LINC00167-201ENST00000530583 1419 ntBASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 PMS2P2-201ENST00000425039 1128 ntBASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 AF238378.1-201ENST00000526806 358 ntBASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 AL136038.4-201ENST00000603606 1261 ntBASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM88BA6NKF7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 MIR564-202ENST00000385049 94 ntBASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM88BA6NKF7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 MIR940-201ENST00000401276 94 ntBASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 AL031284.1-201ENST00000419297 478 ntBASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC22.46■■□□□ 1.19
TMEM88BA6NKF7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms