Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAI2Q9Y5P3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RAI2Q9Y5P3 AC006971.1-201ENST00000407916 4486 ntBASIC4.53□□□□□ -1.68
RAI2Q9Y5P3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RAI2Q9Y5P3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 MTND4P31-201ENST00000425607 1343 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 RNU1-63P-201ENST00000383902 164 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 RPS26P8-201ENST00000393490 348 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 RNA5SP296-201ENST00000410523 111 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 SNRPFP1-201ENST00000414761 252 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 GTF2IP23-201ENST00000423746 351 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 RPL21P110-201ENST00000433345 446 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 BX248409.1-201ENST00000455497 255 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 RPS27AP17-201ENST00000463344 455 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AC011979.1-201ENST00000472300 483 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AC093755.1-201ENST00000512950 1023 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AC090819.1-201ENST00000523800 1111 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AP001317.1-201ENST00000531194 960 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AC008015.1-201ENST00000555505 465 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AC090312.2-201ENST00000582687 378 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AC121247.2-201ENST00000604776 136 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AL160281.1-201ENST00000605307 311 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AC114781.5-201ENST00000615297 108 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 AC006065.6-201ENST00000625201 545 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 RNA5SP196-201ENST00000625967 102 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RAI2Q9Y5P3 OR51H2P-202ENST00000641424 3046 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 RNU6-249P-201ENST00000363016 102 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 SNORD113-6-201ENST00000363345 75 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 RNU5A-2P-201ENST00000384337 116 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 MIR1302-8-201ENST00000408342 128 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 AC114814.2-201ENST00000419195 485 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 PDSS1P1-201ENST00000422953 1114 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 BX119904.4-201ENST00000424402 301 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 OR4C10P-201ENST00000434991 931 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 PRSS3P4-201ENST00000453323 162 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 AL133244.1-201ENST00000456007 258 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 RPL23AP24-201ENST00000458203 385 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 RPL7P19-201ENST00000469948 618 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 RN7SL132P-201ENST00000478131 296 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 RNU6-1129P-201ENST00000515964 104 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 RNA5SP497-201ENST00000516081 97 ntBASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.51□□□□□ -1.69
RAI2Q9Y5P3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms