Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 RPL23AP57-201ENST00000332361 466 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 EIF5P1-201ENST00000400019 1231 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AL121972.1-201ENST00000402023 252 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 RPS24P12-201ENST00000402084 394 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 Y_RNA.625-201ENST00000411256 107 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 PGBD4P8-201ENST00000412993 562 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 RPL17P12-201ENST00000413391 526 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 MTCO2P34-201ENST00000421994 607 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 RPS27AP14-201ENST00000422868 454 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 FABP7P2-201ENST00000429946 379 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 KCTD10P1-201ENST00000434203 625 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC006466.1-201ENST00000438721 289 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC092641.1-201ENST00000440229 772 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC079097.1-201ENST00000512187 1399 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC122688.1-201ENST00000541494 223 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 PCNPP1-201ENST00000552501 511 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 RN7SL290P-201ENST00000578661 300 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AP005403.1-201ENST00000579720 229 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC011840.5-201ENST00000582125 771 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC007566.2-201ENST00000603642 413 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC090948.2-201ENST00000607363 564 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AP000254.1-201ENST00000609934 520 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC104073.3-201ENST00000610942 955 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 AC093535.2-201ENST00000624769 2326 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 CYP3A51P-201ENST00000633513 256 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AP002907.1-201ENST00000606361 1430 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 RN7SKP115-201ENST00000363177 317 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 RNU1-130P-201ENST00000363930 160 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 RNA5SP241-201ENST00000391326 114 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AC025750.1-201ENST00000399891 379 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 MIR1305-201ENST00000408300 86 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 RN7SKP247-201ENST00000411094 308 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AL663109.1-201ENST00000411498 844 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 RPL7P30-201ENST00000420888 709 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 RPS27AP7-201ENST00000422792 455 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AC008065.1-201ENST00000428525 348 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 RPL36AP15-201ENST00000444514 266 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 EEF1E1P1-201ENST00000446998 430 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 IGBP1P3-201ENST00000447449 1000 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 ST13P20-201ENST00000447996 1065 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AZGP1P2-201ENST00000454506 345 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 RNU7-136P-201ENST00000458819 69 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AC098976.1-201ENST00000513014 541 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 RNA5SP373-201ENST00000517271 95 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AP003033.1-201ENST00000527244 415 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AP004607.2-201ENST00000533949 322 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 RN7SL802P-201ENST00000577858 299 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AC090181.2-201ENST00000602975 672 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms