Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 AF131216.2-201ENST00000512316 564 ntBASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AC018442.3-201ENST00000523025 183 ntBASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AC141257.3-201ENST00000572906 215 ntBASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 MIR4675-201ENST00000577898 77 ntBASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 MIR4715-201ENST00000584117 79 ntBASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 BNIP3P23-201ENST00000599655 511 ntBASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AC112187.2-201ENST00000604345 283 ntBASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AL590392.1-201ENST00000604960 446 ntBASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AP001521.1-201ENST00000609150 300 ntBASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AC103710.4-201ENST00000609301 899 ntBASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AC092162.3-201ENST00000624511 1624 ntBASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZNRF3Q9ULT6 AC006210.2-201ENST00000367074 1545 ntBASIC6.09□□□□□ -1.44
ZNRF3Q9ULT6 ELF2P3-201ENST00000445099 1506 ntBASIC6.09□□□□□ -1.44
ZNRF3Q9ULT6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.44
ZNRF3Q9ULT6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 DHX40P1-201ENST00000588725 1412 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 HMGB3P23-201ENST00000414981 585 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 OR8F1P-201ENST00000425243 930 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 IPMKP1-201ENST00000425988 855 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 DPPA2P1-201ENST00000428060 556 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 MTND1P2-201ENST00000430604 821 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AC022431.1-201ENST00000450941 438 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 FGF7P6-202ENST00000451282 293 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AC091564.1-201ENST00000464563 479 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 RPL31P58-201ENST00000469001 379 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 MTND6P6-201ENST00000478031 263 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 PGBD4P4-201ENST00000509673 613 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AC026412.2-201ENST00000512270 1075 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 RNU6-150P-201ENST00000516237 95 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 RPS3AP4-201ENST00000555161 764 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 BNIP3P8-201ENST00000597863 560 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AC025857.2-201ENST00000602711 238 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AC131902.3-201ENST00000611767 581 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AC091304.9-201ENST00000612091 226 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AL359535.1-201ENST00000612100 1087 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AC108479.2-201ENST00000617314 601 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AC068831.8-201ENST00000620171 435 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AC116563.2-201ENST00000624751 535 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 CRYM-AS1-204ENST00000637983 556 ntBASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.08□□□□□ -1.44
ZNRF3Q9ULT6 AC134882.1-201ENST00000603738 1676 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 TCP11X1-202ENST00000622971 1372 ntBASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZNRF3Q9ULT6 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms