Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC008627.1-201ENST00000517511 1704 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AL049780.3-201ENST00000624612 1583 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 RNU1-136P-201ENST00000384181 164 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 DHFRP6-201ENST00000401776 268 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AL356967.1-201ENST00000406305 431 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 GAPDHP42-201ENST00000406848 981 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AL354890.1-201ENST00000413730 346 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC119618.1-201ENST00000434191 222 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AL627308.1-201ENST00000435693 821 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC002381.1-201ENST00000447049 280 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 PABPC1P3-201ENST00000469174 459 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 SNRPCP3-201ENST00000474888 476 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC010587.1-201ENST00000505809 469 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC104986.1-201ENST00000517978 436 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 IGLVIV-64-201ENST00000518581 301 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 HMGB1P42-201ENST00000532126 553 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC087241.2-201ENST00000535801 324 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC023050.3-201ENST00000541142 333 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 HMGB1P6-201ENST00000569046 646 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 RPL26P30-202ENST00000602923 645 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC145423.1-201ENST00000605712 336 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 AC093838.1-201ENST00000613014 469 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 NLRP3P1-201ENST00000622303 1785 ntBASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SALL4Q9UJQ4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AC005294.1-201ENST00000355509 281 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 RNU1-85P-201ENST00000364127 164 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 SNORA32.2-201ENST00000384049 122 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 MIR606-201ENST00000384851 96 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 MIR137-201ENST00000385223 102 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AL031679.1-201ENST00000400616 525 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AC019097.1-201ENST00000424783 735 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 MTCO3P21-201ENST00000430791 643 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 ATP5LP2-201ENST00000440646 311 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 BRK1P2-201ENST00000442875 223 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AL161722.1-201ENST00000446972 1032 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AC006480.1-201ENST00000449887 378 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 RPS20P32-201ENST00000456044 356 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 MTCO3P2-201ENST00000457365 171 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AC098847.1-201ENST00000473094 348 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AC012123.2-201ENST00000485809 248 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 RPS3AP50-201ENST00000487064 803 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AC025458.1-201ENST00000506046 166 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AC105384.2-201ENST00000508433 640 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 PCBP2P3-201ENST00000509726 843 ntBASIC6.15□□□□□ -1.42
SALL4Q9UJQ4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms