Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.27□□□□□ -1.73
SCN11AQ9UI33 AC008885.1-201ENST00000514930 301 ntBASIC4.27□□□□□ -1.73
SCN11AQ9UI33 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 MIR2682-201ENST00000580305 110 ntBASIC4.27□□□□□ -1.73
SCN11AQ9UI33 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.27□□□□□ -1.73
SCN11AQ9UI33 AC017071.1-201ENST00000564407 2204 ntBASIC4.26□□□□□ -1.73
SCN11AQ9UI33 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 CR383658.2-201ENST00000547576 1525 ntBASIC4.26□□□□□ -1.73
SCN11AQ9UI33 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 AC000123.3-201ENST00000624029 4975 ntBASIC4.26□□□□□ -1.73
SCN11AQ9UI33 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 SNORA7.4-201ENST00000384249 137 ntBASIC4.26□□□□□ -1.73
SCN11AQ9UI33 AC093719.1-202ENST00000392735 373 ntBASIC4.26□□□□□ -1.73
SCN11AQ9UI33 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 SYT14P1-201ENST00000481459 721 ntBASIC4.26□□□□□ -1.73
SCN11AQ9UI33 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.26□□□□□ -1.73
SCN11AQ9UI33 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 AC099489.2-201ENST00000574976 260 ntBASIC4.26□□□□□ -1.73
SCN11AQ9UI33 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 AL162274.2-201ENST00000614406 332 ntBASIC4.26□□□□□ -1.73
SCN11AQ9UI33 AC018692.3-201ENST00000623929 123 ntBASIC4.26□□□□□ -1.73
SCN11AQ9UI33 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCN11AQ9UI33 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 AC092111.2-201ENST00000611627 1414 ntBASIC4.25□□□□□ -1.73
SCN11AQ9UI33 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 RNU4-44P-201ENST00000363050 141 ntBASIC4.25□□□□□ -1.73
SCN11AQ9UI33 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 AC010307.1-201ENST00000467206 836 ntBASIC4.25□□□□□ -1.73
SCN11AQ9UI33 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 LARP7P3-201ENST00000579888 337 ntBASIC4.25□□□□□ -1.73
SCN11AQ9UI33 AL359757.2-201ENST00000624309 274 ntBASIC4.25□□□□□ -1.73
SCN11AQ9UI33 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 AL356489.2-201ENST00000566968 3528 ntBASIC4.25□□□□□ -1.73
SCN11AQ9UI33 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 RNA5SP80-201ENST00000410475 111 ntBASIC4.25□□□□□ -1.73
SCN11AQ9UI33 RNU4-47P-201ENST00000410876 114 ntBASIC4.25□□□□□ -1.73
SCN11AQ9UI33 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 AL158071.1-201ENST00000430315 461 ntBASIC4.25□□□□□ -1.73
SCN11AQ9UI33 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 MTND2P25-201ENST00000449028 610 ntBASIC4.25□□□□□ -1.73
SCN11AQ9UI33 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.25□□□□□ -1.73
SCN11AQ9UI33 AL356321.1-201ENST00000621360 228 ntBASIC4.25□□□□□ -1.73
SCN11AQ9UI33 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCN11AQ9UI33 AL391417.1-201ENST00000404100 426 ntBASIC4.24□□□□□ -1.73
SCN11AQ9UI33 AL356968.1-201ENST00000416622 474 ntBASIC4.24□□□□□ -1.73
SCN11AQ9UI33 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCN11AQ9UI33 AC012065.2-201ENST00000421295 375 ntBASIC4.24□□□□□ -1.73
SCN11AQ9UI33 FTLP19-201ENST00000433300 394 ntBASIC4.24□□□□□ -1.73
SCN11AQ9UI33 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN11AQ9UI33 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCN11AQ9UI33 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
SCN11AQ9UI33 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN11AQ9UI33 AC034105.3-201ENST00000565294 442 ntBASIC4.24□□□□□ -1.73
SCN11AQ9UI33 AC006504.3-201ENST00000586818 523 ntBASIC4.24□□□□□ -1.73
SCN11AQ9UI33 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN11AQ9UI33 AC013412.1-201ENST00000610687 192 ntBASIC4.24□□□□□ -1.73
SCN11AQ9UI33 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN11AQ9UI33 FAM35BP-202ENST00000497389 3337 ntBASIC4.24□□□□□ -1.73
SCN11AQ9UI33 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCN11AQ9UI33 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
SCN11AQ9UI33 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.23□□□□□ -1.73
SCN11AQ9UI33 RNU6-249P-201ENST00000363016 102 ntBASIC4.23□□□□□ -1.73
SCN11AQ9UI33 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.23□□□□□ -1.73
SCN11AQ9UI33 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.23□□□□□ -1.73
SCN11AQ9UI33 AP001992.1-205ENST00000462248 379 ntBASIC4.23□□□□□ -1.73
SCN11AQ9UI33 RPL27AP5-201ENST00000469428 449 ntBASIC4.23□□□□□ -1.73
SCN11AQ9UI33 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.23□□□□□ -1.73
SCN11AQ9UI33 KC877373.1-201ENST00000479066 408 ntBASIC4.23□□□□□ -1.73
SCN11AQ9UI33 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.23□□□□□ -1.73
SCN11AQ9UI33 KC877982.1-201ENST00000602313 470 ntBASIC4.23□□□□□ -1.73
SCN11AQ9UI33 AC006023.1-201ENST00000603944 259 ntBASIC4.23□□□□□ -1.73
SCN11AQ9UI33 HMGB1P50-201ENST00000605814 607 ntBASIC4.23□□□□□ -1.73
SCN11AQ9UI33 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SCN11AQ9UI33 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN11AQ9UI33 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN11AQ9UI33 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SCN11AQ9UI33 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.23□□□□□ -1.73
SCN11AQ9UI33 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCN11AQ9UI33 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SCN11AQ9UI33 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN11AQ9UI33 AL139132.1-201ENST00000431587 344 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms