Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.51□□□□□ -1.53
PPARGC1AQ9UBK2 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC005294.1-201ENST00000355509 281 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 RNU6-114P-201ENST00000384704 105 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 MIR323B-201ENST00000385269 82 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 RNA5SP241-201ENST00000391326 114 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 HMGB1P17-201ENST00000403495 628 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 RNU2-28P-201ENST00000410457 189 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 SDCBPP2-201ENST00000424643 885 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC109583.1-201ENST00000432156 268 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC074386.1-201ENST00000476560 767 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 IGBP1P4-201ENST00000503202 879 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 PGAM1P13-201ENST00000507497 754 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 RNA5SP373-201ENST00000517271 95 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 FTH1P11-201ENST00000517577 551 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC022878.1-201ENST00000530684 149 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 RPL10P14-201ENST00000565265 298 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 MIR5697-201ENST00000578045 78 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AL359535.1-201ENST00000612100 1087 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AL592295.2-201ENST00000612578 206 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC073136.1-201ENST00000449426 2884 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AC133552.1-201ENST00000569988 4007 ntBASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PPARGC1AQ9UBK2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 SMG1P6-201ENST00000532337 2930 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 Y_RNA.9-201ENST00000362354 101 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 RNU6-444P-201ENST00000383988 108 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 SNORA67-201ENST00000384423 137 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 Y_RNA.554-201ENST00000384672 102 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 U8.14-201ENST00000390843 143 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 SNORA48.4-201ENST00000391089 134 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 SNORA68.2-201ENST00000391263 128 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 HSPA8P15-201ENST00000401676 786 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 MIR1277-201ENST00000408536 78 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 RN7SKP266-201ENST00000410232 287 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 RN7SKP229-201ENST00000410465 302 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 AC008280.1-201ENST00000418851 412 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 AC099336.2-201ENST00000422457 254 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 TIMM9P3-201ENST00000428659 274 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 PPIAP13-201ENST00000434706 478 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 AC073614.1-201ENST00000438690 650 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 ELOCP10-201ENST00000440624 327 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 AC112653.1-201ENST00000443851 386 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 AC099560.2-201ENST00000457554 255 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 PPIAP21-201ENST00000464473 501 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 AC106872.3-201ENST00000495104 446 ntBASIC5.49□□□□□ -1.53
PPARGC1AQ9UBK2 AC005912.1-201ENST00000495392 255 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms