Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC021146.8-201ENST00000507455 733 ntBASIC5.08□□□□□ -1.6
COL20A1Q9P218 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL20A1Q9P218 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 HNRNPKP5-201ENST00000515300 253 ntBASIC5.08□□□□□ -1.6
COL20A1Q9P218 RN7SKP31-201ENST00000516354 278 ntBASIC5.08□□□□□ -1.6
COL20A1Q9P218 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 MIR4999-201ENST00000585029 91 ntBASIC5.08□□□□□ -1.6
COL20A1Q9P218 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 AC006539.2-201ENST00000601729 572 ntBASIC5.08□□□□□ -1.6
COL20A1Q9P218 IMMP1LP1-201ENST00000605170 488 ntBASIC5.08□□□□□ -1.6
COL20A1Q9P218 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 AC009704.2-201ENST00000618739 483 ntBASIC5.08□□□□□ -1.6
COL20A1Q9P218 AL445567.2-201ENST00000618935 498 ntBASIC5.08□□□□□ -1.6
COL20A1Q9P218 AC079248.2-201ENST00000623779 326 ntBASIC5.08□□□□□ -1.6
COL20A1Q9P218 AC006065.6-201ENST00000625201 545 ntBASIC5.08□□□□□ -1.6
COL20A1Q9P218 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 AL672167.1-203ENST00000641299 2975 ntBASIC5.08□□□□□ -1.6
COL20A1Q9P218 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL20A1Q9P218 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.08□□□□□ -1.6
COL20A1Q9P218 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL20A1Q9P218 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL20A1Q9P218 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL20A1Q9P218 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL20A1Q9P218 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC139769.1-204ENST00000472297 1931 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC107027.3-201ENST00000565095 3473 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC008079.2-201ENST00000623543 20396 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 RNU6-931P-201ENST00000363850 107 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 RNA5SP479-201ENST00000364858 117 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL20A1Q9P218 EI24P3-201ENST00000399046 1062 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 AL390023.1-201ENST00000428836 262 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 RPL31P54-201ENST00000429803 370 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 UBE2V1P1-201ENST00000430836 445 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 PHBP16-201ENST00000446318 950 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 NF1P3-201ENST00000457709 450 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 CYCSP34-201ENST00000458172 304 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 RPS27AP17-201ENST00000463344 455 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 FTH1P2-201ENST00000466086 412 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC041039.1-201ENST00000485656 536 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL20A1Q9P218 AL356057.1-201ENST00000533798 831 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 ISCA1P3-201ENST00000577104 373 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC090616.2-202ENST00000584248 222 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 PIGPP4-201ENST00000584447 307 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 NF1P5-201ENST00000588287 448 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC097505.1-201ENST00000610199 565 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL20A1Q9P218 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL20A1Q9P218 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL20A1Q9P218 XPOTP1-201ENST00000443317 2398 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 CDR1-202ENST00000625883 1485 ntBASIC5.07□□□□□ -1.6
COL20A1Q9P218 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
COL20A1Q9P218 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL20A1Q9P218 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 EIF2AP4-201ENST00000424793 1781 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL20A1Q9P218 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL20A1Q9P218 ZNF542P-204ENST00000482727 1305 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 MUC2-202ENST00000613187 4845 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC016716.1-201ENST00000265882 708 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 RNU1-132P-201ENST00000364300 164 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 HNRNPDP2-201ENST00000406475 478 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.06□□□□□ -1.6
COL20A1Q9P218 USP9YP26-201ENST00000421008 661 ntBASIC5.06□□□□□ -1.6
COL20A1Q9P218 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms