Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AF117829.1-206ENST00000621883 3802 ntBASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 AC018555.1-201ENST00000567548 1980 ntBASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 SNORA48.8-201ENST00000391324 134 ntBASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 AC091826.1-201ENST00000514065 313 ntBASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 RPL12P50-201ENST00000603116 116 ntBASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 AL158062.1-201ENST00000619632 745 ntBASIC4.46□□□□□ -1.7
PHRF1Q9P1Y6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 SRP72P2-201ENST00000344851 1979 ntBASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 AC007390.2-201ENST00000606229 3803 ntBASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 RN7SL93P-201ENST00000463035 293 ntBASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 MIR6715A-201ENST00000615929 79 ntBASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
PHRF1Q9P1Y6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 AC097634.1-201ENST00000604491 2467 ntBASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 SNORA7.4-201ENST00000384249 137 ntBASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 RPS26P47-201ENST00000427219 348 ntBASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 AL513175.1-201ENST00000431492 780 ntBASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 RPS26P3-201ENST00000470205 348 ntBASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 AC004057.1-201ENST00000485827 348 ntBASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 HIGD1AP3-201ENST00000515857 278 ntBASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 NDUFB9P3-201ENST00000521269 501 ntBASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 AC005242.1-201ENST00000585658 438 ntBASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 MTCO1P24-201ENST00000515438 1558 ntBASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 AL645568.2-201ENST00000432815 1337 ntBASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 LINC02471-203ENST00000641941 4752 ntBASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.44□□□□□ -1.7
PHRF1Q9P1Y6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 MTND2P11-201ENST00000423638 648 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 KC877373.1-201ENST00000479066 408 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 RPS3AP43-201ENST00000479743 781 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 RPL23AP73-201ENST00000492507 471 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 FCF1P3-201ENST00000496394 590 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AC006946.3-201ENST00000609791 756 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 MIR7106-201ENST00000612419 65 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AL157817.1-201ENST00000614264 790 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AL022311.1-201ENST00000623726 19416 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AC011503.2-201ENST00000594230 1500 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AC062016.1-201ENST00000355719 319 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 MIR422A-201ENST00000362286 90 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 RNA5SP322-201ENST00000363617 119 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 RPL5P18-201ENST00000406671 891 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AC006028.1-201ENST00000438379 402 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 SCARNA20.6-201ENST00000517251 106 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 KCTD9P6-201ENST00000522306 950 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AC006518.1-201ENST00000541449 943 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AC087888.1-201ENST00000550884 1254 ntBASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PHRF1Q9P1Y6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 AC000123.3-201ENST00000624029 4975 ntBASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 AL513302.2-201ENST00000562313 1842 ntBASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 MIR449A-201ENST00000362113 91 ntBASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms