Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 PNPT1P2-201ENST00000456768 2050 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 RNA5SP232-201ENST00000364144 119 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 SNORA64.3-201ENST00000365647 134 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 RNU6-26P-201ENST00000383985 107 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 RNU6-1109P-201ENST00000391187 107 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 MTCO2P33-201ENST00000402100 465 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 MIR1275-201ENST00000408770 80 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 CHIAP3-201ENST00000423668 1133 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AC006548.1-201ENST00000427470 102 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 GAPDHP33-201ENST00000443168 1013 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 RPL21P71-201ENST00000465598 459 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 RNU6-408P-201ENST00000515910 100 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 RNU6-566P-201ENST00000516790 107 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 RNU6-1220P-201ENST00000517126 108 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AC005519.1-201ENST00000554490 601 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AC106785.4-201ENST00000569492 412 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AF038458.1-201ENST00000588406 262 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AL513327.3-201ENST00000602618 469 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AL713866.2-201ENST00000603579 219 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AL359704.2-201ENST00000604335 521 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AC073488.9-201ENST00000631601 754 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 ZNF402P-201ENST00000404435 3100 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 HSPD1P8-201ENST00000400121 1658 ntBASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CUEDC1Q9NWM3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC073365.1-203ENST00000641055 1992 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 PARP4P2-201ENST00000446672 3326 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 RNA5SP140-201ENST00000364524 92 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 RNU4-66P-201ENST00000365199 138 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 RNU6-444P-201ENST00000383988 108 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 SOD2P1-201ENST00000396543 562 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 SSXP10-201ENST00000402595 565 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 MIR548I2-201ENST00000408348 149 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 RNU2-28P-201ENST00000410457 189 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AL713922.1-201ENST00000416477 747 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC010881.1-201ENST00000433830 235 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC128677.1-201ENST00000436016 442 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC008571.1-201ENST00000467232 300 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC092451.1-201ENST00000480211 153 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC063943.2-201ENST00000495697 534 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 SNORD27.1-201ENST00000516319 72 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 RNU6-1088P-201ENST00000516850 104 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 SOD1P3-201ENST00000518682 454 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AP003115.1-201ENST00000569849 463 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC090312.1-201ENST00000580637 348 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 MIR4732-201ENST00000581873 76 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 MIR3942-201ENST00000585264 109 ntBASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.38□□□□□ -1.39
CUEDC1Q9NWM3 AC004805.2-201ENST00000605382 482 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms