Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 RPL7P31-201ENST00000450192 724 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 HMGB1P4-201ENST00000455362 567 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 ARPC3P2-201ENST00000457786 533 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 SETP14-201ENST00000497538 873 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AC100784.1-201ENST00000522790 310 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 MIR4737-201ENST00000583979 81 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AL596327.1-201ENST00000603629 213 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AC233280.2-201ENST00000603917 1070 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AL121890.2-201ENST00000617644 465 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AC234782.5-201ENST00000617723 324 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AC092650.2-201ENST00000619984 902 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AC138649.3-201ENST00000622154 254 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AP003122.6-201ENST00000623831 495 ntBASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BCAS3Q9H6U6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 RN7SKP113-201ENST00000363891 295 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AL035079.1-201ENST00000405210 287 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 FAR2P2-201ENST00000413041 594 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AC092647.1-201ENST00000420654 287 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 FAR2P4-202ENST00000425399 584 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 RPL21P110-201ENST00000433345 446 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AL450023.3-201ENST00000440592 271 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 RPL5P25-201ENST00000441148 775 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AL354714.3-201ENST00000447284 493 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 MTND6P5-201ENST00000448266 512 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AC006463.2-201ENST00000473326 348 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AC111193.1-201ENST00000504097 155 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 PTGES3P3-201ENST00000511479 482 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 RNU6-507P-201ENST00000516045 100 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 PAICSP4-201ENST00000517543 1253 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AC040958.1-201ENST00000561102 201 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AC090616.5-202ENST00000582111 297 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AC005730.3-201ENST00000583067 366 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 SS18L2P2-201ENST00000583960 235 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AC008745.1-201ENST00000604064 271 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AP000907.4-201ENST00000604143 237 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AP004247.3-201ENST00000608682 624 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AL592295.2-201ENST00000612578 206 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 AC068870.3-201ENST00000625077 2536 ntBASIC5.62□□□□□ -1.51
BCAS3Q9H6U6 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BCAS3Q9H6U6 AC063976.2-201ENST00000425667 3556 ntBASIC5.61□□□□□ -1.51
BCAS3Q9H6U6 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms