Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC008782.1-201ENST00000603386 430 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC233280.2-201ENST00000603917 1070 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 SEPT14P19-203ENST00000633205 211 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 RBPJP7-201ENST00000442803 1447 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 RBPJP5-201ENST00000449433 1447 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC006206.1-201ENST00000544842 3387 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC012020.1-201ENST00000624541 1728 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 RNA5SP326-201ENST00000363209 110 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 RNU6-853P-201ENST00000364306 107 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 RPS20P2-201ENST00000402520 389 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AL049697.2-201ENST00000403708 294 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 RPS3AP2-201ENST00000407190 754 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 SDHDP6-201ENST00000414693 480 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 C1DP2-201ENST00000418167 426 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 RPL36AP36-201ENST00000418616 301 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 GNG5P5-201ENST00000420444 220 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC007742.1-201ENST00000425789 329 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 ELOCP26-201ENST00000436067 329 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 RPL22P17-201ENST00000438729 315 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC127537.2-201ENST00000439258 465 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 VDAC2P4-201ENST00000452925 711 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC098824.1-201ENST00000453565 980 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 HMGB1P15-201ENST00000453854 435 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 RPS23P2-201ENST00000463671 415 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC093853.1-201ENST00000515689 483 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 RNU6-430P-201ENST00000517078 107 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 IGLVIV-53-201ENST00000520107 367 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC022404.1-201ENST00000555320 273 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC091078.2-201ENST00000557145 559 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AL121834.1-201ENST00000572284 509 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AL359999.1-201ENST00000604513 294 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC007684.1-201ENST00000609671 477 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AL021918.2-201ENST00000613415 194 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC092447.10-201ENST00000620607 1652 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 OR13C1P-202ENST00000641378 2919 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC112198.2-201ENST00000426589 6996 ntBASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM55Q9BYV6 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 NUP58P1-201ENST00000502546 1738 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 RNA5SP394-201ENST00000364216 119 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms