Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MIR4512-201ENST00000583257 77 ntBASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 OR7E18P-201ENST00000592589 702 ntBASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 AL161729.3-201ENST00000603533 673 ntBASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 AL390816.3-201ENST00000604527 1066 ntBASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 AL592436.1-201ENST00000605135 558 ntBASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 AC027449.1-201ENST00000608890 407 ntBASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 AP003497.2-201ENST00000624220 967 ntBASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 AP000843.1-201ENST00000624880 701 ntBASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC28BQ9BUN5 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 GTF2H2B-203ENST00000508065 1432 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 RPL7AP52-201ENST00000458096 790 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AC010468.1-201ENST00000461022 817 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AL049830.2-201ENST00000480072 201 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 PRELID3BP6-201ENST00000503839 571 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 SUMO2P5-201ENST00000506790 245 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AC011611.5-201ENST00000552477 578 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 MIR3186-201ENST00000577404 85 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 MIR4425-201ENST00000580572 84 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AL606834.3-201ENST00000602615 496 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 RPAP2P1-201ENST00000603626 1168 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AC069431.2-201ENST00000604149 1099 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AL050303.3-201ENST00000613704 284 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 MIR7151-201ENST00000617477 60 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AC073569.3-201ENST00000619055 682 ntBASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC28BQ9BUN5 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 RNA5SP27-201ENST00000363839 119 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 RNU6-304P-201ENST00000364855 107 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 RNU6-932P-201ENST00000391108 106 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 EI24P2-201ENST00000397776 1076 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 RPS3AP23-201ENST00000401762 784 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 RPL37P18-201ENST00000411602 243 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC013404.1-201ENST00000413068 249 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 RPL7AP73-201ENST00000413490 353 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 MTCYBP32-201ENST00000427945 1084 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 RPS29P17-201ENST00000430795 166 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC000041.1-201ENST00000439655 175 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 MED6P1-201ENST00000439659 713 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC004854.1-201ENST00000440356 349 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 RPS29P31-201ENST00000446147 164 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC073264.2-201ENST00000448886 166 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC009963.2-201ENST00000453431 138 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AL035407.2-201ENST00000454090 378 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC006539.3-201ENST00000454258 129 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms