Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC009951.1-201ENST00000623674 2614 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AL353746.1-201ENST00000566293 6881 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 RNA5SP443-201ENST00000363083 132 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 RNU6-1176P-201ENST00000390955 107 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AL391417.1-201ENST00000404100 426 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 RPL21P65-201ENST00000406094 466 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 MTATP6P31-201ENST00000406985 692 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 UBE2V1P11-201ENST00000411559 285 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AMD1P2-201ENST00000412936 992 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC245028.1-201ENST00000423259 256 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC009965.2-201ENST00000425328 970 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 NDUFB1P1-201ENST00000435191 180 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 RPS26P40-201ENST00000435209 294 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 PPIAP17-201ENST00000438507 471 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC239809.1-201ENST00000450470 217 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 RPS23P7-201ENST00000466210 444 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC104629.1-201ENST00000494226 508 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC106872.2-201ENST00000494303 480 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 MTCO3P27-201ENST00000514397 196 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 MRPL49P2-201ENST00000521066 465 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 MTND5P21-201ENST00000531961 522 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 RFPL1S-203ENST00000539579 330 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 MIR4716-201ENST00000579628 84 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC015726.1-201ENST00000602353 681 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC125494.3-201ENST00000602759 455 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC110741.2-201ENST00000605278 268 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 RNU4-89P-201ENST00000607443 133 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 OR6R2P-201ENST00000609216 300 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC096586.1-201ENST00000610267 561 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 MIR6867-201ENST00000610636 67 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC093875.1-201ENST00000623688 504 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC022893.2-201ENST00000564832 3296 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 AC104446.1-201ENST00000613728 1321 ntBASIC3.18□□□□□ -1.9
HDHD3Q9BSH5 HSPA8P1-201ENST00000425843 1833 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AL118496.1-201ENST00000440201 1812 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 PNPT1P2-201ENST00000456768 2050 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 MIR423-201ENST00000362201 94 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 MIR1303-201ENST00000408625 86 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC008173.1-201ENST00000418901 264 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AL138785.1-201ENST00000425821 331 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 HIGD1AP12-201ENST00000427832 281 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC093422.3-201ENST00000428506 305 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC009263.1-201ENST00000441193 1239 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 RPL7P31-201ENST00000450192 724 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 HMGB3P21-201ENST00000452483 547 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 GTF2IP12-201ENST00000456547 356 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC006511.1-201ENST00000470614 315 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC104687.1-201ENST00000485829 412 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 RPS23P1-201ENST00000491662 432 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC111193.1-201ENST00000504097 155 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC008565.1-201ENST00000509046 885 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AP003355.1-201ENST00000518956 587 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 OR5AP1P-201ENST00000529730 940 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC092851.1-201ENST00000535964 478 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 MIR3908-201ENST00000579798 126 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms