Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USB1Q9BQ65 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
USB1Q9BQ65 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USB1Q9BQ65 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USB1Q9BQ65 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.44□□□□□ -1.38
USB1Q9BQ65 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USB1Q9BQ65 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USB1Q9BQ65 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USB1Q9BQ65 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USB1Q9BQ65 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 RN7SKP257-201ENST00000364525 309 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 Y_RNA.297-201ENST00000364950 91 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USB1Q9BQ65 RNU6-946P-201ENST00000383878 107 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 RNU6-1293P-201ENST00000384077 107 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC090114.1-201ENST00000393266 448 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 RNU2-14P-201ENST00000411053 191 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 RNA5SP111-201ENST00000411386 101 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 AL354983.1-201ENST00000434580 906 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AL645936.1-201ENST00000441979 518 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 AL031274.1-201ENST00000450334 232 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 RN7SL432P-201ENST00000484057 298 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC135721.1-201ENST00000497954 479 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 AP003396.4-201ENST00000527574 265 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USB1Q9BQ65 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC011611.6-201ENST00000547483 255 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 AL031846.1-201ENST00000560933 314 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC015720.2-201ENST00000567709 334 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC104763.2-201ENST00000604179 382 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 CYCSP1-201ENST00000604815 315 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AL451044.1-201ENST00000604867 238 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AL078624.2-201ENST00000605063 554 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AL022394.1-201ENST00000606979 292 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 RNU6-156P-201ENST00000621869 107 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC108751.5-201ENST00000492880 1336 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 AC119674.1-204ENST00000641348 1343 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USB1Q9BQ65 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 CDY19P-201ENST00000411668 1613 ntBASIC6.43□□□□□ -1.38
USB1Q9BQ65 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.43□□□□□ -1.38
USB1Q9BQ65 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 RN7SKP118-201ENST00000364331 330 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 RNU4-50P-201ENST00000364361 141 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 SNORA51.11-201ENST00000384442 131 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 Y_RNA.539-201ENST00000384635 107 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 MIR517A-201ENST00000385001 87 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 AL138885.1-201ENST00000405921 675 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 RNU6-516P-201ENST00000411381 104 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 AP000275.1-201ENST00000411943 390 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 RPL35AP22-201ENST00000436855 335 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC005040.1-201ENST00000437783 482 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC004383.1-201ENST00000438135 289 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 NEFMP1-201ENST00000443423 1006 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 RPS17P13-201ENST00000448974 407 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 OR2AQ1P-201ENST00000451972 200 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 FABP5P13-201ENST00000452144 328 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms