Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.8□□□□□ -1.8
SSX3Q99909 AC079168.2-201ENST00000453977 416 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 MTATP6P14-201ENST00000455189 673 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX3Q99909 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.8□□□□□ -1.8
SSX3Q99909 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX3Q99909 RN7SL459P-201ENST00000481078 302 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 AC139783.2-201ENST00000504847 1145 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX3Q99909 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX3Q99909 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.8□□□□□ -1.8
SSX3Q99909 MTATP6P9-201ENST00000515039 680 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.8□□□□□ -1.8
SSX3Q99909 OR4R3P-201ENST00000525084 838 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 NDUFS5P6-201ENST00000529136 295 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 OR8I1P-201ENST00000529291 931 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX3Q99909 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX3Q99909 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.8□□□□□ -1.8
SSX3Q99909 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.8□□□□□ -1.8
SSX3Q99909 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSX3Q99909 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX3Q99909 AC112230.1-201ENST00000604342 547 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 AL391834.2-201ENST00000609982 546 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 MIR7703-201ENST00000620784 77 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.8□□□□□ -1.8
SSX3Q99909 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SSX3Q99909 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSX3Q99909 AC026951.1-201ENST00000559530 2459 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 EXOC5P1-201ENST00000510543 1969 ntBASIC3.8□□□□□ -1.8
SSX3Q99909 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SSX3Q99909 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSX3Q99909 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX3Q99909 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.79□□□□□ -1.8
SSX3Q99909 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX3Q99909 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.79□□□□□ -1.8
SSX3Q99909 SEPT7P7-201ENST00000420492 1301 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX3Q99909 RNU6-374P-201ENST00000364146 108 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 RNA5SP189-201ENST00000364920 115 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSX3Q99909 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSX3Q99909 RNU6-925P-201ENST00000384629 104 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSX3Q99909 TMSB4XP8-201ENST00000402089 135 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 Z98745.1-201ENST00000402553 494 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX3Q99909 AC016397.1-201ENST00000412463 242 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSX3Q99909 TMSB4XP6-201ENST00000415187 135 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX3Q99909 UBTFL3-201ENST00000418934 1024 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC140479.3-201ENST00000418944 1126 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX3Q99909 MTCYBP24-201ENST00000420387 1106 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 USP9YP21-201ENST00000420603 432 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC244098.2-201ENST00000422068 99 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC009480.2-201ENST00000422916 432 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 TMSB4XP1-201ENST00000424567 135 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX3Q99909 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX3Q99909 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX3Q99909 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSX3Q99909 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSX3Q99909 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX3Q99909 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX3Q99909 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.79□□□□□ -1.8
SSX3Q99909 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX3Q99909 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX3Q99909 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX3Q99909 UBTFL6-201ENST00000477929 1024 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 NIPA2P2-201ENST00000496376 1083 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC104164.2-201ENST00000496953 495 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX3Q99909 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX3Q99909 AC023141.12-201ENST00000512399 199 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC015795.1-201ENST00000513669 327 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX3Q99909 RNU6-1028P-201ENST00000517164 93 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 IGKV2D-36-201ENST00000518643 226 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 RAB9BP1-201ENST00000519581 626 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX3Q99909 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.79□□□□□ -1.8
SSX3Q99909 IGLV3-26-201ENST00000520756 302 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX3Q99909 OR5D17P-201ENST00000531492 978 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSX3Q99909 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.79□□□□□ -1.8
SSX3Q99909 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.79□□□□□ -1.8
SSX3Q99909 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
SSX3Q99909 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.79□□□□□ -1.8
SSX3Q99909 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.79□□□□□ -1.8
SSX3Q99909 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX3Q99909 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX3Q99909 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX3Q99909 RN7SL690P-201ENST00000582087 240 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC090616.5-202ENST00000582111 297 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC022069.1-201ENST00000582910 658 ntBASIC3.79□□□□□ -1.8
SSX3Q99909 AC244505.7-201ENST00000599675 272 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms