Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.48□□□□□ -1.53
IFT140Q96RY7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.48□□□□□ -1.53
IFT140Q96RY7 RPS4XP2-201ENST00000458402 793 ntBASIC5.48□□□□□ -1.53
IFT140Q96RY7 SETP1-201ENST00000556014 845 ntBASIC5.48□□□□□ -1.53
IFT140Q96RY7 EIF5A2P1-201ENST00000564027 460 ntBASIC5.48□□□□□ -1.53
IFT140Q96RY7 AC233702.9-201ENST00000581528 203 ntBASIC5.48□□□□□ -1.53
IFT140Q96RY7 KC877982.1-201ENST00000602313 470 ntBASIC5.48□□□□□ -1.53
IFT140Q96RY7 AL162713.1-201ENST00000604480 262 ntBASIC5.48□□□□□ -1.53
IFT140Q96RY7 BNIP3P10-201ENST00000605360 577 ntBASIC5.48□□□□□ -1.53
IFT140Q96RY7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
IFT140Q96RY7 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.48□□□□□ -1.53
IFT140Q96RY7 CR383658.2-201ENST00000547576 1525 ntBASIC5.48□□□□□ -1.53
IFT140Q96RY7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.47□□□□□ -1.53
IFT140Q96RY7 OR5BR1P-201ENST00000524992 1330 ntBASIC5.47□□□□□ -1.53
IFT140Q96RY7 NPM1P38-201ENST00000403835 865 ntBASIC5.47□□□□□ -1.53
IFT140Q96RY7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.47□□□□□ -1.53
IFT140Q96RY7 AF228730.2-201ENST00000438784 848 ntBASIC5.47□□□□□ -1.53
IFT140Q96RY7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC5.47□□□□□ -1.53
IFT140Q96RY7 RN7SL432P-201ENST00000484057 298 ntBASIC5.47□□□□□ -1.53
IFT140Q96RY7 HMGB3P14-201ENST00000494195 599 ntBASIC5.47□□□□□ -1.53
IFT140Q96RY7 RNU6-237P-201ENST00000515985 71 ntBASIC5.47□□□□□ -1.53
IFT140Q96RY7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
IFT140Q96RY7 DUXAP6-201ENST00000553858 601 ntBASIC5.47□□□□□ -1.53
IFT140Q96RY7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.47□□□□□ -1.53
IFT140Q96RY7 H3F3AP1-201ENST00000559984 334 ntBASIC5.47□□□□□ -1.53
IFT140Q96RY7 MIR4319-201ENST00000577285 85 ntBASIC5.47□□□□□ -1.53
IFT140Q96RY7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.47□□□□□ -1.53
IFT140Q96RY7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.47□□□□□ -1.53
IFT140Q96RY7 BDH2P1-201ENST00000602288 736 ntBASIC5.47□□□□□ -1.53
IFT140Q96RY7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
IFT140Q96RY7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.47□□□□□ -1.53
IFT140Q96RY7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
IFT140Q96RY7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.47□□□□□ -1.53
IFT140Q96RY7 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
IFT140Q96RY7 NPM1P17-201ENST00000479221 602 ntBASIC5.46□□□□□ -1.53
IFT140Q96RY7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.46□□□□□ -1.53
IFT140Q96RY7 AC005798.1-201ENST00000513715 387 ntBASIC5.46□□□□□ -1.53
IFT140Q96RY7 AC103783.1-201ENST00000520506 373 ntBASIC5.46□□□□□ -1.53
IFT140Q96RY7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
IFT140Q96RY7 AC100793.4-201ENST00000613683 429 ntBASIC5.46□□□□□ -1.53
IFT140Q96RY7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.46□□□□□ -1.53
IFT140Q96RY7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.46□□□□□ -1.54
IFT140Q96RY7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
IFT140Q96RY7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
IFT140Q96RY7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
IFT140Q96RY7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
IFT140Q96RY7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.45□□□□□ -1.54
IFT140Q96RY7 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
IFT140Q96RY7 AC073069.1-201ENST00000428657 441 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 AL035407.1-201ENST00000429211 571 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.45□□□□□ -1.54
IFT140Q96RY7 AC105272.1-201ENST00000438604 198 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 KRTAP19-11P-201ENST00000439851 104 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 AL135938.1-201ENST00000443141 297 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC5.45□□□□□ -1.54
IFT140Q96RY7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
IFT140Q96RY7 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.45□□□□□ -1.54
IFT140Q96RY7 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.45□□□□□ -1.54
IFT140Q96RY7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.45□□□□□ -1.54
IFT140Q96RY7 SULT1C2P2-201ENST00000562517 294 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.45□□□□□ -1.54
IFT140Q96RY7 AC018690.1-201ENST00000608144 626 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.45□□□□□ -1.54
IFT140Q96RY7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC5.45□□□□□ -1.54
IFT140Q96RY7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
IFT140Q96RY7 AL672296.1-201ENST00000427780 2158 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.45□□□□□ -1.54
IFT140Q96RY7 SLC31A1P1-201ENST00000451221 567 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.45□□□□□ -1.54
IFT140Q96RY7 RFPL4AP5-201ENST00000514977 504 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 AC026333.2-201ENST00000542164 106 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 AC087888.1-201ENST00000550884 1254 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.45□□□□□ -1.54
IFT140Q96RY7 NRBF2P5-201ENST00000603087 788 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 AC068722.2-201ENST00000618734 544 ntBASIC5.45□□□□□ -1.54
IFT140Q96RY7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.44□□□□□ -1.54
IFT140Q96RY7 LINC02471-203ENST00000641941 4752 ntBASIC5.44□□□□□ -1.54
IFT140Q96RY7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
IFT140Q96RY7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
IFT140Q96RY7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
IFT140Q96RY7 AL645568.2-201ENST00000432815 1337 ntBASIC5.44□□□□□ -1.54
IFT140Q96RY7 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
IFT140Q96RY7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.44□□□□□ -1.54
IFT140Q96RY7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
IFT140Q96RY7 SETP15-201ENST00000412724 337 ntBASIC5.44□□□□□ -1.54
IFT140Q96RY7 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
IFT140Q96RY7 UBL5P2-201ENST00000583788 219 ntBASIC5.44□□□□□ -1.54
IFT140Q96RY7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.44□□□□□ -1.54
IFT140Q96RY7 AC112503.1-201ENST00000608436 391 ntBASIC5.44□□□□□ -1.54
IFT140Q96RY7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC5.44□□□□□ -1.54
IFT140Q96RY7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.44□□□□□ -1.54
IFT140Q96RY7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC5.43□□□□□ -1.54
IFT140Q96RY7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
IFT140Q96RY7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
IFT140Q96RY7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.43□□□□□ -1.54
IFT140Q96RY7 RPL21P109-201ENST00000422213 475 ntBASIC5.43□□□□□ -1.54
IFT140Q96RY7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.43□□□□□ -1.54
IFT140Q96RY7 SNORD39.4-201ENST00000620099 78 ntBASIC5.43□□□□□ -1.54
IFT140Q96RY7 AL669942.2-201ENST00000620352 697 ntBASIC5.43□□□□□ -1.54
IFT140Q96RY7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms