Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM11Q96F44 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM11Q96F44 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM11Q96F44 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM11Q96F44 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM11Q96F44 Y_RNA.187-201ENST00000363918 113 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
TRIM11Q96F44 RNU6-456P-201ENST00000384493 107 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 AL390316.1-201ENST00000406279 553 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM11Q96F44 AC234781.4-201ENST00000419384 244 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM11Q96F44 OR10T1P-201ENST00000424327 947 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 RPEP2-201ENST00000432149 701 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM11Q96F44 YWHAEP1-201ENST00000453697 763 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 Y_RNA.635-201ENST00000459041 101 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 AC012181.1-201ENST00000479895 423 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 RN7SL568P-201ENST00000493069 298 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 MTCO1P29-201ENST00000496868 288 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM11Q96F44 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM11Q96F44 AC093303.1-201ENST00000514549 295 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 SNORA70.11-201ENST00000515987 138 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 SNORA70.13-201ENST00000516116 138 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 Vault.3-201ENST00000516676 95 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM11Q96F44 AC022861.1-201ENST00000522981 663 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM11Q96F44 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM11Q96F44 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM11Q96F44 AC009161.2-201ENST00000624626 138 ntBASIC6.29□□□□□ -1.4
TRIM11Q96F44 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM11Q96F44 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM11Q96F44 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM11Q96F44 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM11Q96F44 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM11Q96F44 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM11Q96F44 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM11Q96F44 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM11Q96F44 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 OR4G1P-203ENST00000641984 1631 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM11Q96F44 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM11Q96F44 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM11Q96F44 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM11Q96F44 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM11Q96F44 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM11Q96F44 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM11Q96F44 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM11Q96F44 Y_RNA.25-201ENST00000362528 102 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 RNA5SP110-201ENST00000362638 115 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 Y_RNA.112-201ENST00000363250 102 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 Y_RNA.176-201ENST00000363815 109 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 RN7SKP250-201ENST00000363924 321 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM11Q96F44 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM11Q96F44 RNU6-1062P-201ENST00000383908 107 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 RNU6-452P-201ENST00000384406 107 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 SNRPEP6-201ENST00000407465 277 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC127391.1-201ENST00000411737 98 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 HSPE1P16-201ENST00000426640 348 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 RPSAP65-201ENST00000429660 595 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC108479.1-201ENST00000431142 427 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 AL445928.1-201ENST00000435545 222 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC096775.1-201ENST00000437724 448 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC006335.2-201ENST00000437993 330 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 AL445466.1-201ENST00000448432 357 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 HMGB1P7-201ENST00000450921 612 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 SLC31A1P1-201ENST00000451221 567 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 VN1R17P-201ENST00000472048 1090 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 RPL38P3-201ENST00000484463 213 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC013356.1-201ENST00000489027 564 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 RNU6-583P-201ENST00000516012 92 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 RNU6-388P-201ENST00000517012 105 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 RNU6-389P-201ENST00000517048 105 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC027544.3-201ENST00000535082 757 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM11Q96F44 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM11Q96F44 AP001180.3-201ENST00000582221 145 ntBASIC6.28□□□□□ -1.4
TRIM11Q96F44 AC011500.1-201ENST00000601963 469 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms