Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC126323.6-202ENST00000568092 3511 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HPS3Q969F9 CYP1D1P-201ENST00000416662 1433 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HPS3Q969F9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HPS3Q969F9 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HPS3Q969F9 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HPS3Q969F9 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HPS3Q969F9 RN7SKP149-201ENST00000363008 344 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HPS3Q969F9 UBBP2-201ENST00000376781 231 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 AL080315.1-201ENST00000406055 466 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 RNU2-28P-201ENST00000410457 189 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 RNA5SP113-201ENST00000410486 84 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.23□□□□□ -1.57
HPS3Q969F9 P2RY10P2-201ENST00000416730 913 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.23□□□□□ -1.57
HPS3Q969F9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HPS3Q969F9 FABP7P1-201ENST00000424004 391 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 RPL12P34-201ENST00000424532 479 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 AL035407.1-201ENST00000429211 571 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HPS3Q969F9 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.23□□□□□ -1.57
HPS3Q969F9 RPL12P46-201ENST00000436610 195 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.23□□□□□ -1.57
HPS3Q969F9 MTND2P20-201ENST00000440805 661 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AC097262.1-201ENST00000452559 548 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 DDX39BP2-208ENST00000453923 258 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AC092754.2-201ENST00000463506 460 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
HPS3Q969F9 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AF186190.1-201ENST00000517470 480 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.23□□□□□ -1.57
HPS3Q969F9 MTCO1P49-201ENST00000523429 802 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AC107918.3-201ENST00000533272 382 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AC007954.1-201ENST00000554198 494 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 AC105129.1-201ENST00000560250 297 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.23□□□□□ -1.57
HPS3Q969F9 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AC005084.1-201ENST00000605160 304 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 AL359535.1-201ENST00000612100 1087 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AC073530.2-201ENST00000623987 261 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 AC098679.5-201ENST00000624394 571 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.23□□□□□ -1.57
HPS3Q969F9 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.23□□□□□ -1.57
HPS3Q969F9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
HPS3Q969F9 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HPS3Q969F9 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HPS3Q969F9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HPS3Q969F9 DHX9P1-201ENST00000436565 3076 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HPS3Q969F9 AC010928.1-201ENST00000592477 1447 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 OR5BR1P-201ENST00000524992 1330 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 AC011477.1-204ENST00000623416 1325 ntBASIC5.23□□□□□ -1.57
HPS3Q969F9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
HPS3Q969F9 AL031119.1-201ENST00000404707 1879 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
HPS3Q969F9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HPS3Q969F9 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS3Q969F9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HPS3Q969F9 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS3Q969F9 Y_RNA.18-201ENST00000362461 102 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HPS3Q969F9 SNORD116-9-201ENST00000384000 95 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 SNORD116-3-201ENST00000384287 95 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 SNORD116-7-201ENST00000384404 95 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 SNORD116-5-201ENST00000384462 95 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS3Q969F9 RN7SKP182-201ENST00000410772 298 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 USP9YP33-201ENST00000412220 421 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS3Q969F9 SEPT2P1-201ENST00000419651 180 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.22□□□□□ -1.57
HPS3Q969F9 BX119904.4-201ENST00000424402 301 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 VDAC1P6-201ENST00000430062 855 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.22□□□□□ -1.57
HPS3Q969F9 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.22□□□□□ -1.57
HPS3Q969F9 USP9YP35-201ENST00000435696 412 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 AC105402.2-201ENST00000438503 358 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.22□□□□□ -1.57
HPS3Q969F9 RPL36AP15-201ENST00000444514 266 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HPS3Q969F9 MTCO1P48-201ENST00000448024 1096 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS3Q969F9 RPL31P3-201ENST00000458430 332 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms