Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TM9SF4Q92544 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TM9SF4Q92544 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF4Q92544 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF4Q92544 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF4Q92544 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF4Q92544 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 RNU4-92P-201ENST00000363783 136 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 AL445189.1-201ENST00000405722 338 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 RNA5SP498-201ENST00000411342 120 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 AL008987.1-201ENST00000415528 237 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 SKP1P3-201ENST00000429280 487 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 RPS3AP54-201ENST00000435535 734 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 HMGB3P6-201ENST00000444896 598 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 RPS27AP15-201ENST00000447672 466 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 AL121877.1-201ENST00000453704 622 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC091167.1-201ENST00000492017 396 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC008565.1-201ENST00000509046 885 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 VWA8P1-201ENST00000510889 176 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC008694.2-201ENST00000517591 306 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF4Q92544 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC090515.3-201ENST00000560431 315 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC008088.1-201ENST00000580993 280 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC008759.1-201ENST00000589783 983 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC013444.2-201ENST00000603317 787 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC113403.1-201ENST00000604910 193 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC008966.2-201ENST00000606157 453 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AL583856.2-201ENST00000606298 543 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC010857.1-201ENST00000606398 594 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 U6.48-201ENST00000618523 106 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC091304.6-201ENST00000619761 202 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AC024595.1-201ENST00000623088 387 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 AL356121.2-201ENST00000624715 780 ntBASIC4.13□□□□□ -1.75
TM9SF4Q92544 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF4Q92544 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF4Q92544 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF4Q92544 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF4Q92544 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.13□□□□□ -1.75
TM9SF4Q92544 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
TM9SF4Q92544 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF4Q92544 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF4Q92544 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF4Q92544 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF4Q92544 AC012020.1-201ENST00000624541 1728 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 AC022893.2-201ENST00000564832 3296 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TM9SF4Q92544 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF4Q92544 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF4Q92544 AC074029.4-201ENST00000624796 1859 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF4Q92544 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF4Q92544 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TM9SF4Q92544 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF4Q92544 MIR383-201ENST00000362257 73 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 SNORD116.1-201ENST00000365628 92 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.12□□□□□ -1.75
TM9SF4Q92544 RNU6-225P-201ENST00000384613 103 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF4Q92544 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.12□□□□□ -1.75
TM9SF4Q92544 RNU6-603P-201ENST00000411403 107 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 HMGB1P49-201ENST00000418882 569 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 RAD23BP1-201ENST00000421404 1227 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 AP001324.1-201ENST00000428553 399 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 DYNLL1P7-201ENST00000429273 258 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 HIGD1AP4-201ENST00000430194 280 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 CDY14P-201ENST00000431260 1014 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 SETP8-201ENST00000435341 628 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.12□□□□□ -1.75
TM9SF4Q92544 CDY12P-201ENST00000440679 1015 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.12□□□□□ -1.75
TM9SF4Q92544 AL592437.1-201ENST00000443781 492 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 CDY13P-201ENST00000445813 1015 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 Z83846.1-201ENST00000446798 265 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 AC233982.1-201ENST00000451247 436 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 CDY23P-201ENST00000451661 1014 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 DNAJC19P8-201ENST00000452887 259 ntBASIC4.12□□□□□ -1.75
TM9SF4Q92544 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.12□□□□□ -1.75
TM9SF4Q92544 AC133473.1-201ENST00000455173 299 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms