Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.68□□□□□ -1.5
DDX1Q92499 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.68□□□□□ -1.5
DDX1Q92499 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.68□□□□□ -1.5
DDX1Q92499 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.68□□□□□ -1.5
DDX1Q92499 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.68□□□□□ -1.5
DDX1Q92499 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.68□□□□□ -1.5
DDX1Q92499 AC090502.2-201ENST00000549267 280 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.68□□□□□ -1.5
DDX1Q92499 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.68□□□□□ -1.5
DDX1Q92499 AC090515.3-201ENST00000560431 315 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AC005341.1-201ENST00000571086 708 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.68□□□□□ -1.5
DDX1Q92499 AL162431.4-201ENST00000604674 411 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AC068276.1-201ENST00000605793 379 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AC087045.1-201ENST00000605856 382 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.68□□□□□ -1.5
DDX1Q92499 MIR7844-201ENST00000616161 122 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 MIR6839-201ENST00000620425 113 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AC012414.7-202ENST00000622705 1090 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
DDX1Q92499 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.68□□□□□ -1.5
DDX1Q92499 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
DDX1Q92499 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DDX1Q92499 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DDX1Q92499 AL121839.2-201ENST00000565058 6943 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DDX1Q92499 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DDX1Q92499 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DDX1Q92499 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DDX1Q92499 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
DDX1Q92499 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
DDX1Q92499 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
DDX1Q92499 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
DDX1Q92499 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
DDX1Q92499 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
DDX1Q92499 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.67□□□□□ -1.5
DDX1Q92499 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.67□□□□□ -1.5
DDX1Q92499 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.67□□□□□ -1.5
DDX1Q92499 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.67□□□□□ -1.5
DDX1Q92499 Y_RNA.302-201ENST00000364997 102 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
DDX1Q92499 RNY3P10-201ENST00000384764 102 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 MIR181A1-201ENST00000385026 110 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 RPS4XP9-201ENST00000405151 780 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 RNU2-28P-201ENST00000410457 189 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.67□□□□□ -1.5
DDX1Q92499 AL031736.2-201ENST00000426573 787 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.67□□□□□ -1.5
DDX1Q92499 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.67□□□□□ -1.5
DDX1Q92499 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.67□□□□□ -1.5
DDX1Q92499 OR6C5P-201ENST00000452388 923 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.67□□□□□ -1.5
DDX1Q92499 MTND1P11-201ENST00000456661 876 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 RN7SL814P-201ENST00000487715 300 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 AC023424.2-201ENST00000493479 777 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
DDX1Q92499 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.67□□□□□ -1.5
DDX1Q92499 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.67□□□□□ -1.5
DDX1Q92499 AC046134.1-201ENST00000514454 666 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.67□□□□□ -1.5
DDX1Q92499 OR5AL2P-201ENST00000532185 920 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.67□□□□□ -1.5
DDX1Q92499 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.67□□□□□ -1.5
DDX1Q92499 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.67□□□□□ -1.5
DDX1Q92499 AL138976.2-201ENST00000563989 694 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 MTCO3P13-201ENST00000577757 781 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.67□□□□□ -1.5
DDX1Q92499 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.67□□□□□ -1.5
DDX1Q92499 AC020914.6-201ENST00000594327 272 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.67□□□□□ -1.5
DDX1Q92499 RNU6-88P-201ENST00000606801 100 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 AC024560.3-201ENST00000608482 349 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 AC126915.2-201ENST00000610957 190 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 Y_RNA.804-201ENST00000615262 101 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 AC123768.4-201ENST00000616244 701 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 AC231657.1-201ENST00000624313 397 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
DDX1Q92499 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 MTND5P26-201ENST00000426018 1752 ntBASIC5.67□□□□□ -1.5
DDX1Q92499 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DDX1Q92499 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.67□□□□□ -1.5
DDX1Q92499 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
DDX1Q92499 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
DDX1Q92499 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
DDX1Q92499 AL157700.1-201ENST00000561973 1432 ntBASIC5.66□□□□□ -1.5
DDX1Q92499 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
DDX1Q92499 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms