Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 MAPK10-303ENST00000641324 3959 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 SNORA74A-201ENST00000364089 198 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 MIR921-201ENST00000401133 56 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 MIR1284-201ENST00000408337 120 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 RNA5SP296-201ENST00000410523 111 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 RN7SKP167-201ENST00000411047 285 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 RN7SKP142-201ENST00000411236 328 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 MTCO1P21-201ENST00000416634 589 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 MTCO2P34-201ENST00000421994 607 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 CENPIP1-201ENST00000425713 902 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 MTND1P27-201ENST00000451117 902 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 OR6C5P-201ENST00000452388 923 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 RNU6-956P-201ENST00000458868 103 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 RPL21P71-201ENST00000465598 459 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 RN7SL629P-201ENST00000489622 285 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 GAPDHP56-201ENST00000506031 988 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 RNA5SP446-201ENST00000515955 82 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 RNU6-1261P-201ENST00000517194 104 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AF279873.1-201ENST00000523393 313 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AC022880.1-201ENST00000534017 973 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 TRAV15-201ENST00000556680 249 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AC105129.1-201ENST00000560250 297 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AC093519.1-201ENST00000566109 298 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 MIR3611-201ENST00000584484 83 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 MTCYBP22-201ENST00000603788 447 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AL122125.1-201ENST00000616999 600 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AC091905.4-201ENST00000623432 202 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AL359740.1-201ENST00000624340 592 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 AC092435.4-201ENST00000623012 4159 ntBASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4AQ8WYN0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 RNU1-20P-201ENST00000363314 162 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 RNA5SP151-201ENST00000365632 117 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 RNU2-65P-201ENST00000410162 185 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC002524.1-201ENST00000411687 547 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 PGBD4P8-201ENST00000412993 562 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AL136133.1-201ENST00000413694 376 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 ZNF114P1-201ENST00000453500 292 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC090142.1-201ENST00000465776 462 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC025164.1-201ENST00000496249 478 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC021146.3-201ENST00000511911 260 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 RNY4P37-201ENST00000516225 96 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 CYCSP28-201ENST00000534284 321 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC008033.2-201ENST00000542626 177 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 GSTP1P1-201ENST00000548078 319 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 ATP5J2P6-201ENST00000565203 266 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AL512347.1-201ENST00000566420 503 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 ZNF415P1-201ENST00000582279 1166 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC115085.1-201ENST00000588924 229 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC022146.1-201ENST00000595307 847 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC128687.1-201ENST00000605304 619 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AL031775.1-201ENST00000607014 887 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms