Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 AC106785.3-201ENST00000564064 847 ntBASIC4.53□□□□□ -1.68
SNED1Q8TER0 AC040904.1-201ENST00000590850 223 ntBASIC4.53□□□□□ -1.68
SNED1Q8TER0 AC006272.2-201ENST00000594725 163 ntBASIC4.53□□□□□ -1.68
SNED1Q8TER0 AC068790.5-201ENST00000602741 355 ntBASIC4.53□□□□□ -1.68
SNED1Q8TER0 AC025165.5-201ENST00000602802 578 ntBASIC4.53□□□□□ -1.68
SNED1Q8TER0 AC133552.5-201ENST00000604266 540 ntBASIC4.53□□□□□ -1.68
SNED1Q8TER0 AC093783.1-201ENST00000612976 329 ntBASIC4.53□□□□□ -1.68
SNED1Q8TER0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 Z99129.2-201ENST00000619967 314 ntBASIC4.53□□□□□ -1.68
SNED1Q8TER0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNED1Q8TER0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNED1Q8TER0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNED1Q8TER0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SNED1Q8TER0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNED1Q8TER0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNED1Q8TER0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 MIR122-201ENST00000385044 85 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 MTND4P13-201ENST00000402078 1023 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 PTGES3P2-201ENST00000407942 482 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 RNA5SP306-201ENST00000411087 107 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 OR4K6P-201ENST00000416478 897 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 OSTCP5-201ENST00000425293 453 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 HMGN1P5-201ENST00000448591 263 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 AC105918.1-201ENST00000474399 838 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 AC108729.2-201ENST00000476543 840 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 AL049873.1-201ENST00000480540 376 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 OR8K4P-201ENST00000534608 872 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 MTCYBP27-201ENST00000555160 670 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 AL445435.1-201ENST00000604232 665 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 AL354760.1-201ENST00000608357 643 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 AP001033.2-201ENST00000609701 1003 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 CR392039.4-201ENST00000624968 501 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 AP000553.6-201ENST00000641242 118 ntBASIC4.52□□□□□ -1.69
SNED1Q8TER0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNED1Q8TER0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.52□□□□□ -1.69
SNED1Q8TER0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SNED1Q8TER0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNED1Q8TER0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNED1Q8TER0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNED1Q8TER0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNED1Q8TER0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 AC106754.1-201ENST00000562632 1513 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 AC007529.1-201ENST00000418574 2178 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 AC107027.3-201ENST00000565095 3473 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 MIR513A2-201ENST00000385249 127 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 AC069282.1-201ENST00000411911 526 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 AC005019.1-201ENST00000436455 431 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 CLIC4P1-201ENST00000453177 535 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 MTND2P30-201ENST00000456663 382 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 RN7SL809P-201ENST00000482040 297 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 RNU2-27P-201ENST00000516185 142 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 snoU109.6-201ENST00000516831 118 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 AC027807.1-201ENST00000559921 996 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 AC090877.1-201ENST00000561418 344 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 AL390816.3-201ENST00000604527 1066 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 AL513477.2-201ENST00000607858 568 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 AL591424.2-201ENST00000617023 128 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 AC015722.2-201ENST00000622210 551 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms