Protein–RNA interactions for Protein: Q8NDQ6

ZNF540, Zinc finger protein 540, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540Q8NDQ6 AC011998.1-201ENST00000433403 117 ntBASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 AC092170.1-201ENST00000440211 356 ntBASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 TPTE2P3-201ENST00000441562 1189 ntBASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 RPL23AP43-201ENST00000446445 471 ntBASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 RNU7-170P-201ENST00000459303 61 ntBASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 AC104057.1-201ENST00000515547 497 ntBASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 AP001207.1-201ENST00000524051 481 ntBASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 RPL12P25-202ENST00000598100 674 ntBASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 OR4H6P-202ENST00000603819 340 ntBASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 MIR7702-201ENST00000621931 59 ntBASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 U6.98-201ENST00000637157 84 ntBASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF540Q8NDQ6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC021146.4-201ENST00000309229 279 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AL049693.1-201ENST00000402760 611 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 RN7SKP56-201ENST00000410513 331 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 UBE2V1P9-201ENST00000414760 368 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 FAR1P1-201ENST00000427163 934 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 RPL36P19-201ENST00000430744 301 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 RPL23AP89-201ENST00000439324 255 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AL691517.1-201ENST00000440833 1235 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 MTND4LP2-201ENST00000502312 285 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC133963.2-201ENST00000513686 578 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 RN7SKP244-201ENST00000516513 307 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AP003385.6-201ENST00000531603 374 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC092851.1-201ENST00000535964 478 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 CR383656.14-201ENST00000551951 406 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC084783.1-201ENST00000565846 910 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 HMGB1P50-201ENST00000605814 607 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AL450270.1-201ENST00000606160 391 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC020658.4-201ENST00000613987 684 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC020978.9-201ENST00000624380 1141 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AL356118.1-201ENST00000635272 1078 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC139713.2-214ENST00000642059 1811 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AC091152.2-201ENST00000591628 2569 ntBASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF540Q8NDQ6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 FAM3C2-201ENST00000312214 681 ntBASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 MT-TC-201ENST00000387405 66 ntBASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 RPL31P1-201ENST00000398116 372 ntBASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 AC007390.1-201ENST00000415722 356 ntBASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 AC096632.1-201ENST00000427395 310 ntBASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.91□□□□□ -1.78
ZNF540Q8NDQ6 ARL4AP4-201ENST00000434170 518 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms