Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AL136295.6-201ENST00000610486 658 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AC003001.2-201ENST00000616294 831 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AF001550.2-201ENST00000636643 217 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 MIR492-201ENST00000638676 116 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 ZNF542P-204ENST00000482727 1305 ntBASIC3.96□□□□□ -1.77
CCDC50Q8IVM0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 SNORA70C-201ENST00000384538 135 ntBASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 SNORA57.3-201ENST00000411095 141 ntBASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 HIGD1AP12-201ENST00000427832 281 ntBASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 AL162151.2-201ENST00000448875 158 ntBASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 RPL23AP44-201ENST00000482216 473 ntBASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 AC108941.1-201ENST00000502853 530 ntBASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 NDUFB4P9-201ENST00000511646 388 ntBASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 AC026616.1-201ENST00000523157 525 ntBASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 OR4U1P-201ENST00000554958 912 ntBASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 AL713922.2-201ENST00000619384 716 ntBASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 CR392039.4-201ENST00000624968 501 ntBASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 OR6C71P-202ENST00000641886 1107 ntBASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC50Q8IVM0 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 SNORD115-48-201ENST00000364764 76 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 U3.15-201ENST00000365398 212 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 SNORA11B-201ENST00000408175 129 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 ARL2BPP3-201ENST00000421226 480 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 FO393419.3-201ENST00000428741 282 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 ZNF965P-201ENST00000432501 817 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 ZFAND6P1-201ENST00000434138 605 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 SNORA71B-202ENST00000439232 272 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 RPS15AP29-201ENST00000445539 400 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 TPTE2P6-202ENST00000445572 1007 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 MTND5P8-201ENST00000449817 1083 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 RPL6P9-201ENST00000466502 859 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 RN7SL330P-201ENST00000469709 307 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 RN7SKP122-201ENST00000515923 296 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AC008802.1-201ENST00000519121 791 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AP002812.4-201ENST00000532139 286 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AC025260.1-201ENST00000548858 430 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 ABI1P1-201ENST00000603375 1120 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 BX323046.1-201ENST00000610145 535 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AL356490.1-201ENST00000623079 479 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 AL118508.4-201ENST00000624142 1176 ntBASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC50Q8IVM0 SPRR2C-201ENST00000290702 219 ntBASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 MIR372-201ENST00000362225 67 ntBASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 SNORD51.1-201ENST00000365405 77 ntBASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 U1.1-201ENST00000384101 164 ntBASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 RPS12P23-201ENST00000419579 400 ntBASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 USP9YP31-201ENST00000431405 881 ntBASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 RPL12P26-201ENST00000452430 487 ntBASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 CYCSP53-201ENST00000455540 265 ntBASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms