Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC099489.2-201ENST00000574976 260 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AP005119.1-201ENST00000580956 292 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 uc_338.15-201ENST00000615470 191 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC009237.17-201ENST00000618111 748 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 OR11H5P-202ENST00000641612 1325 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 AC083837.1-201ENST00000565297 2994 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
ATG4DQ86TL0 LINC00561-201ENST00000565815 2738 ntBASIC5.39□□□□□ -1.55
ATG4DQ86TL0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 Y_RNA.187-201ENST00000363918 113 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 RNU6-209P-201ENST00000384118 107 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 MT-TP-201ENST00000387461 68 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 RNU2-8P-201ENST00000410727 190 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 RPS12P17-201ENST00000438591 377 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 KRT8P51-201ENST00000438938 274 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 TXNP5-201ENST00000441043 315 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 RPS24P13-201ENST00000442520 397 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 MRPS31P2-201ENST00000451581 518 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC016724.1-201ENST00000453215 421 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC023194.2-201ENST00000465398 406 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC024558.1-201ENST00000505008 528 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC025458.1-201ENST00000506046 166 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 APOOP3-201ENST00000536787 586 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 FAM106CP-201ENST00000582212 507 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AL390240.1-201ENST00000612950 384 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AL021918.2-201ENST00000613415 194 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC009318.4-201ENST00000620496 486 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 OR2L1P-202ENST00000641567 1023 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 AC007159.1-201ENST00000566529 4706 ntBASIC5.38□□□□□ -1.55
ATG4DQ86TL0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms