Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.02□□□□□ -1.77
C11orf88Q6PI97 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 RNA5SP428-201ENST00000365129 132 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 MIR192-201ENST00000384915 110 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 RNA5SP104-201ENST00000410989 118 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AL133384.1-201ENST00000412744 351 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 KRR1P1-201ENST00000419430 803 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 FNDC3CP-201ENST00000420795 1155 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC007559.1-201ENST00000428736 355 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 VDAC1P6-201ENST00000430062 855 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 BX323845.1-201ENST00000432417 179 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 VDAC1P3-201ENST00000434069 851 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AL138878.2-201ENST00000440581 1241 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 RPL34P20-201ENST00000442771 351 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 ELOCP13-201ENST00000443934 329 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 HMGB1P16-201ENST00000447155 540 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC004022.1-201ENST00000447766 1066 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC010733.1-201ENST00000451515 401 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 CFTRP1-201ENST00000456646 183 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 snoU13.20-201ENST00000459180 104 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 ATP5G1P3-201ENST00000463301 410 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC010285.1-201ENST00000470580 392 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 RN7SL319P-201ENST00000480656 221 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC013828.1-201ENST00000481845 158 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 CEACAMP10-202ENST00000495431 496 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 OR5H5P-201ENST00000503164 928 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC093767.1-201ENST00000504523 156 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 GAPDHP56-201ENST00000506031 988 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC112206.4-201ENST00000515142 405 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 RNA5SP43-201ENST00000516559 110 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 NDUFS5P6-201ENST00000529136 295 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 MIR4737-201ENST00000583979 81 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AL355812.1-201ENST00000603215 216 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC099676.1-201ENST00000608886 657 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC015813.4-201ENST00000610469 179 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC007275.1-201ENST00000621243 671 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 AC091953.3-201ENST00000623220 236 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 MTND2P41-201ENST00000637599 773 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 SAGE4P-201ENST00000442271 3381 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 MAPK10-373ENST00000641983 6772 ntBASIC4.01□□□□□ -1.77
C11orf88Q6PI97 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
C11orf88Q6PI97 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4□□□□□ -1.77
C11orf88Q6PI97 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4□□□□□ -1.77
C11orf88Q6PI97 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4□□□□□ -1.77
C11orf88Q6PI97 AP001350.1-201ENST00000601906 1524 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
C11orf88Q6PI97 AC139713.2-214ENST00000642059 1811 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 SUCLA2P2-201ENST00000417269 1309 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 SUPT16HP1-201ENST00000537175 3133 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
C11orf88Q6PI97 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4□□□□□ -1.77
C11orf88Q6PI97 RNA5SP258-201ENST00000362750 119 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 RN7SKP95-201ENST00000362860 303 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 RNU6-1249P-201ENST00000363237 111 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 RNU2-28P-201ENST00000410457 189 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4□□□□□ -1.77
C11orf88Q6PI97 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4□□□□□ -1.77
C11orf88Q6PI97 AC004552.1-201ENST00000419089 348 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 AC027644.1-201ENST00000419595 298 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 OFD1P12Y-201ENST00000427963 1207 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 AL360081.1-201ENST00000428299 555 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 OFD1P13Y-201ENST00000431179 1232 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4□□□□□ -1.77
C11orf88Q6PI97 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4□□□□□ -1.77
C11orf88Q6PI97 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
C11orf88Q6PI97 KCTD10P1-201ENST00000434203 625 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4□□□□□ -1.77
C11orf88Q6PI97 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4□□□□□ -1.77
C11orf88Q6PI97 CYCSP43-201ENST00000438233 310 ntBASIC4□□□□□ -1.77
C11orf88Q6PI97 snoU13.3-201ENST00000459441 104 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms