Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 DEFB130D-201ENST00000426866 237 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 C4BPAP2-201ENST00000428434 478 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 RPL36P19-201ENST00000430744 301 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 RPS26P56-201ENST00000444468 240 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC017099.1-201ENST00000448261 1028 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 NUTF2P3-201ENST00000448540 384 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 SNRPGP5-201ENST00000456003 220 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 HMGB3P30-201ENST00000457863 606 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC091167.1-201ENST00000492017 396 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC109458.1-201ENST00000508858 316 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC016065.2-201ENST00000514530 444 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 PRELID3BP4-201ENST00000515476 571 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 HIGD1AP6-201ENST00000521833 279 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC138701.1-201ENST00000524329 714 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC079171.1-201ENST00000568788 914 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC022655.2-201ENST00000577280 318 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 MIR3939-201ENST00000582614 106 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC068790.5-201ENST00000602741 355 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 MIR378J-201ENST00000611988 109 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC004825.2-201ENST00000616634 455 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 ZNF849P-201ENST00000594711 1566 ntBASIC3.72□□□□□ -1.81
NIPAL3Q6P499 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.72□□□□□ -1.81
NIPAL3Q6P499 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
NIPAL3Q6P499 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AC126755.2-208ENST00000327792 462 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AC138969.1-213ENST00000331436 462 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 ZNF603P-201ENST00000405613 487 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AL391219.1-201ENST00000422570 483 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 BTF3P10-201ENST00000433415 495 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AC006994.1-201ENST00000438212 839 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 RAB11AP1-201ENST00000442978 646 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 GXYLT1P1-201ENST00000446657 490 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 RPL23AP2-201ENST00000471227 466 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AC087879.1-201ENST00000474343 374 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AC069499.1-201ENST00000489433 509 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AC026979.1-201ENST00000492525 396 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 HIGD1AP3-201ENST00000515857 278 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 SNORA31.9-201ENST00000516429 84 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AL360157.1-201ENST00000565962 87 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AC015911.5-201ENST00000587076 451 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AC005962.2-201ENST00000611427 652 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 AC026368.1-201ENST00000614934 690 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 LARP1BP1-201ENST00000506036 1359 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 MAPK10-373ENST00000641983 6772 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NIPAL3Q6P499 BDP1P-201ENST00000582658 1990 ntBASIC3.71□□□□□ -1.82
NIPAL3Q6P499 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AL355379.1-201ENST00000405542 640 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC073264.1-201ENST00000411508 416 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC069218.2-201ENST00000411665 344 ntBASIC3.7□□□□□ -1.82
NIPAL3Q6P499 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms