Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
LONRF3Q496Y0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 U3.30-201ENST00000391308 210 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 FABP12P1-201ENST00000401911 322 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 RPS16P5-201ENST00000406501 404 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 RNU2-21P-201ENST00000410368 188 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 RN7SKP177-201ENST00000410567 355 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC073264.1-201ENST00000411508 416 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC069218.2-201ENST00000411665 344 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 FAR2P2-201ENST00000413041 594 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AL590139.1-201ENST00000416267 400 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC233981.1-201ENST00000423224 461 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 BX119904.4-201ENST00000424402 301 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 FAR2P4-202ENST00000425399 584 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 OR51AB1P-201ENST00000429046 620 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 VN1R108P-201ENST00000431580 830 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 RPS6P12-201ENST00000432491 726 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 BX276092.4-201ENST00000452056 248 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC009963.2-201ENST00000453431 138 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 NF1P3-201ENST00000457709 450 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 RN7SKP276-201ENST00000516242 268 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AP003461.1-201ENST00000528866 78 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 PDCL2P2-201ENST00000533651 189 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC209154.1-201ENST00000582156 337 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC022726.1-201ENST00000587475 207 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC146944.4-201ENST00000602697 718 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC233280.2-201ENST00000603917 1070 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 MIR378J-201ENST00000611988 109 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AL592148.2-201ENST00000612210 372 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AC107075.1-201ENST00000613695 314 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 AL157770.1-201ENST00000623049 439 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 CR381572.2-201ENST00000624852 397 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 OR8B1P-202ENST00000641132 1178 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 OR11H5P-202ENST00000641612 1325 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 MTCO1P14-201ENST00000441695 1559 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.36□□□□□ -1.55
LONRF3Q496Y0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.36□□□□□ -1.55
LONRF3Q496Y0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 SDAD1P1-202ENST00000524156 2051 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 SNORD96B-201ENST00000386148 79 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 RPS24P12-201ENST00000402084 394 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 BTBD10P2-201ENST00000404779 676 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 RNU4-72P-201ENST00000410754 173 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 PTP4A1P5-201ENST00000420305 455 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 OR4F13P-201ENST00000428478 931 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 FTH1P6-201ENST00000430768 320 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 AC092393.1-201ENST00000439625 742 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 RPS26P56-201ENST00000444468 240 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 ANKRD26P4-201ENST00000455755 950 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 RPL21P71-201ENST00000465598 459 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 AC087385.1-201ENST00000475062 312 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 RPL12P20-201ENST00000475538 479 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 RNA5SP464-201ENST00000516251 108 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 RNU6-885P-201ENST00000516607 104 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.35□□□□□ -1.55
LONRF3Q496Y0 AC068790.4-201ENST00000602474 263 ntBASIC5.35□□□□□ -1.55
LONRF3Q496Y0 AL158042.1-201ENST00000605338 460 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms