Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL445222.1-201ENST00000607259 628 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 AL136370.1-201ENST00000608166 691 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 AL157770.1-201ENST00000623049 439 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SCN1BQ07699 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.98□□□□□ -1.77
SCN1BQ07699 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN1BQ07699 NOL8P1-201ENST00000508336 3529 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 AC010300.1-201ENST00000600671 5134 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN1BQ07699 ZFRP1-201ENST00000457579 2970 ntBASIC3.98□□□□□ -1.77
SCN1BQ07699 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN1BQ07699 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SCN1BQ07699 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN1BQ07699 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN1BQ07699 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCN1BQ07699 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCN1BQ07699 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCN1BQ07699 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.97□□□□□ -1.77
SCN1BQ07699 AL442639.1-201ENST00000625030 1899 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SCN1BQ07699 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.97□□□□□ -1.77
SCN1BQ07699 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCN1BQ07699 RNU6-989P-201ENST00000362756 107 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 SNORD65.1-201ENST00000390889 71 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 RNU6-1300P-201ENST00000391046 108 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 EIF5P1-201ENST00000400019 1231 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AL133384.1-201ENST00000412744 351 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 RPL23AP27-201ENST00000415161 451 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.97□□□□□ -1.77
SCN1BQ07699 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AL449283.1-202ENST00000418249 604 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.97□□□□□ -1.77
SCN1BQ07699 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.97□□□□□ -1.77
SCN1BQ07699 SDCBPP2-201ENST00000424643 885 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.97□□□□□ -1.77
SCN1BQ07699 GTF2IP3-201ENST00000433887 494 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AC093155.1-201ENST00000440164 826 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.97□□□□□ -1.77
SCN1BQ07699 AC079776.3-201ENST00000450665 370 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AC079168.2-201ENST00000453977 416 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 MTATP6P14-201ENST00000455189 673 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 FCF1P6-201ENST00000456841 595 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 GAPDHP56-201ENST00000506031 988 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 RNU2-58P-201ENST00000516403 183 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 MTCYBP41-201ENST00000528913 1123 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AP006289.1-201ENST00000538089 277 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.97□□□□□ -1.77
SCN1BQ07699 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
SCN1BQ07699 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.97□□□□□ -1.77
SCN1BQ07699 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.97□□□□□ -1.77
SCN1BQ07699 AC107982.3-201ENST00000584957 985 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.97□□□□□ -1.77
SCN1BQ07699 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.97□□□□□ -1.77
SCN1BQ07699 AC020914.4-201ENST00000597690 277 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AC068790.7-201ENST00000602347 528 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 MIR432-201ENST00000606207 94 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AC097504.2-201ENST00000608088 454 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.97□□□□□ -1.77
SCN1BQ07699 SDR42E1P1-201ENST00000611327 477 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
SCN1BQ07699 AC009318.4-201ENST00000620496 486 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AC104985.3-201ENST00000623479 597 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 CR381572.2-201ENST00000624852 397 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
SCN1BQ07699 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.97□□□□□ -1.77
SCN1BQ07699 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.97□□□□□ -1.77
SCN1BQ07699 AL031985.3-201ENST00000565390 2449 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCN1BQ07699 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCN1BQ07699 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SCN1BQ07699 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.97□□□□□ -1.77
SCN1BQ07699 Z99496.1-201ENST00000469424 1477 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 MAPK10-253ENST00000641010 4072 ntBASIC3.97□□□□□ -1.77
SCN1BQ07699 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.97□□□□□ -1.77
SCN1BQ07699 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.97□□□□□ -1.77
SCN1BQ07699 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SCN1BQ07699 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
SCN1BQ07699 AL645568.2-201ENST00000432815 1337 ntBASIC3.96□□□□□ -1.77
SCN1BQ07699 AC109780.1-201ENST00000451768 1344 ntBASIC3.96□□□□□ -1.77
SCN1BQ07699 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SCN1BQ07699 INTS6P1-201ENST00000504674 2530 ntBASIC3.96□□□□□ -1.77
SCN1BQ07699 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SCN1BQ07699 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SCN1BQ07699 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCN1BQ07699 RNA5SP191-201ENST00000362585 102 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 RNA5SP502-201ENST00000362694 119 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 RNU1-63P-201ENST00000383902 164 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 RNU6-761P-201ENST00000384148 107 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 RNA5SP306-201ENST00000411087 107 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 OR8G2P-201ENST00000412796 908 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 AL591848.1-201ENST00000413092 322 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 EI24P1-201ENST00000416584 867 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 TOMM22P1-201ENST00000418578 312 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 FNDC3CP-201ENST00000420795 1155 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 MTCO1P54-201ENST00000430139 712 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 SEPT7P5-201ENST00000434048 306 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.96□□□□□ -1.78
SCN1BQ07699 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms