Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.2□□□□□ -1.74
CDK3Q00526 AC006116.5-201ENST00000591936 559 ntBASIC4.2□□□□□ -1.74
CDK3Q00526 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.2□□□□□ -1.74
CDK3Q00526 AL353600.1-201ENST00000608148 251 ntBASIC4.2□□□□□ -1.74
CDK3Q00526 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.2□□□□□ -1.74
CDK3Q00526 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.2□□□□□ -1.74
CDK3Q00526 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.2□□□□□ -1.74
CDK3Q00526 AC009704.2-201ENST00000618739 483 ntBASIC4.2□□□□□ -1.74
CDK3Q00526 AC068831.8-201ENST00000620171 435 ntBASIC4.2□□□□□ -1.74
CDK3Q00526 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.2□□□□□ -1.74
CDK3Q00526 AC019278.1-201ENST00000623516 479 ntBASIC4.2□□□□□ -1.74
CDK3Q00526 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK3Q00526 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK3Q00526 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK3Q00526 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDK3Q00526 MAPK10-349ENST00000641767 3661 ntBASIC4.2□□□□□ -1.74
CDK3Q00526 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CDK3Q00526 AC099786.3-201ENST00000565735 1410 ntBASIC4.2□□□□□ -1.74
CDK3Q00526 MFSD8-220ENST00000641243 1422 ntBASIC4.2□□□□□ -1.74
CDK3Q00526 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
CDK3Q00526 Z95327.2-201ENST00000414579 1873 ntBASIC4.2□□□□□ -1.74
CDK3Q00526 AL592182.3-201ENST00000642132 3304 ntBASIC4.2□□□□□ -1.74
CDK3Q00526 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.19□□□□□ -1.74
CDK3Q00526 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDK3Q00526 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
CDK3Q00526 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDK3Q00526 HMGB1P5-201ENST00000255320 642 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 RNA5SP28-201ENST00000363841 119 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 RN7SKP227-201ENST00000364445 330 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
CDK3Q00526 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDK3Q00526 RNU6-1293P-201ENST00000384077 107 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 ANAPC10P1-201ENST00000395991 556 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.19□□□□□ -1.74
CDK3Q00526 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDK3Q00526 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK3Q00526 MTCO1P3-201ENST00000429327 192 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 PPIAP17-201ENST00000438507 471 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.19□□□□□ -1.74
CDK3Q00526 AC114755.5-201ENST00000447760 831 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 AL589880.1-201ENST00000448271 287 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 ABCF2P2-201ENST00000450549 296 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK3Q00526 RPS6P2-201ENST00000454208 705 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDK3Q00526 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK3Q00526 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
CDK3Q00526 RN7SL41P-201ENST00000476144 297 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
CDK3Q00526 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.19□□□□□ -1.74
CDK3Q00526 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.19□□□□□ -1.74
CDK3Q00526 AC110792.2-201ENST00000510278 224 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 AC099522.1-202ENST00000514718 367 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 RNU6-488P-201ENST00000515918 99 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 SNORD116-26-201ENST00000516006 96 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 AP001207.1-201ENST00000524051 481 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDK3Q00526 OR4C2P-201ENST00000530855 1064 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 AC105233.3-201ENST00000531125 744 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 OR8K4P-201ENST00000534608 872 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDK3Q00526 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CDK3Q00526 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK3Q00526 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDK3Q00526 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.19□□□□□ -1.74
CDK3Q00526 SLC25A36P1-201ENST00000590111 465 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 VN1R83P-201ENST00000595685 445 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 AL591034.3-201ENST00000605511 685 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.19□□□□□ -1.74
CDK3Q00526 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDK3Q00526 RNU6-156P-201ENST00000621869 107 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 AC090506.2-201ENST00000624521 419 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 AC068724.3-201ENST00000625906 87 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.19□□□□□ -1.74
CDK3Q00526 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.19□□□□□ -1.74
CDK3Q00526 MIR492-201ENST00000638676 116 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 MAPK10-304ENST00000641341 3984 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDK3Q00526 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDK3Q00526 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 DCAF13P3-201ENST00000561147 1334 ntBASIC4.19□□□□□ -1.74
CDK3Q00526 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDK3Q00526 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDK3Q00526 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDK3Q00526 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDK3Q00526 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDK3Q00526 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDK3Q00526 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CDK3Q00526 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CDK3Q00526 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDK3Q00526 RNU4-68P-201ENST00000364314 141 ntBASIC4.18□□□□□ -1.74
CDK3Q00526 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDK3Q00526 AL022722.2-201ENST00000402519 180 ntBASIC4.18□□□□□ -1.74
CDK3Q00526 AL136310.1-201ENST00000404926 654 ntBASIC4.18□□□□□ -1.74
CDK3Q00526 AL161631.1-201ENST00000417933 486 ntBASIC4.18□□□□□ -1.74
CDK3Q00526 AC004448.2-201ENST00000422360 586 ntBASIC4.18□□□□□ -1.74
CDK3Q00526 RBMY1KP-201ENST00000423480 476 ntBASIC4.18□□□□□ -1.74
CDK3Q00526 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.18□□□□□ -1.74
CDK3Q00526 AL035246.1-201ENST00000433554 1255 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms