Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.42□□□□□ -1.7
PRAMEP78395 AP001317.1-201ENST00000531194 960 ntBASIC4.42□□□□□ -1.7
PRAMEP78395 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.42□□□□□ -1.7
PRAMEP78395 AC099786.3-201ENST00000565735 1410 ntBASIC4.42□□□□□ -1.7
PRAMEP78395 MTCYBP28-201ENST00000566728 1132 ntBASIC4.42□□□□□ -1.7
PRAMEP78395 AGGF1P6-201ENST00000569213 976 ntBASIC4.42□□□□□ -1.7
PRAMEP78395 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.42□□□□□ -1.7
PRAMEP78395 AC008782.1-201ENST00000603386 430 ntBASIC4.42□□□□□ -1.7
PRAMEP78395 AL450336.1-201ENST00000605180 586 ntBASIC4.42□□□□□ -1.7
PRAMEP78395 AC026368.1-201ENST00000614934 690 ntBASIC4.42□□□□□ -1.7
PRAMEP78395 AL121873.1-201ENST00000616013 524 ntBASIC4.42□□□□□ -1.7
PRAMEP78395 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.42□□□□□ -1.7
PRAMEP78395 MIR7154-201ENST00000620673 73 ntBASIC4.42□□□□□ -1.7
PRAMEP78395 MIR6730-201ENST00000622213 67 ntBASIC4.42□□□□□ -1.7
PRAMEP78395 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.42□□□□□ -1.7
PRAMEP78395 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRAMEP78395 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.42□□□□□ -1.7
PRAMEP78395 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRAMEP78395 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PRAMEP78395 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PRAMEP78395 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRAMEP78395 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PRAMEP78395 MTND5P31-201ENST00000419366 1374 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AL356489.2-201ENST00000566968 3528 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PRAMEP78395 AL139811.1-201ENST00000424779 2299 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AL592148.3-201ENST00000608771 2646 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRAMEP78395 AC067945.1-201ENST00000342609 618 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 MIR448-201ENST00000362131 111 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PRAMEP78395 RNU6-1300P-201ENST00000391046 108 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 BTBD10P2-201ENST00000404779 676 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 RPL23AP48-201ENST00000406913 488 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AL160275.2-201ENST00000412010 394 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.41□□□□□ -1.7
PRAMEP78395 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.41□□□□□ -1.7
PRAMEP78395 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.41□□□□□ -1.7
PRAMEP78395 RBMY2KP-201ENST00000418221 992 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.41□□□□□ -1.7
PRAMEP78395 RWDD4P2-201ENST00000426392 563 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 EIF2S2P2-201ENST00000447161 982 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.41□□□□□ -1.7
PRAMEP78395 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.41□□□□□ -1.7
PRAMEP78395 AC010469.1-201ENST00000463864 576 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 RPL21P126-201ENST00000470049 478 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AC108729.1-201ENST00000487812 947 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.41□□□□□ -1.7
PRAMEP78395 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.41□□□□□ -1.7
PRAMEP78395 AC093720.1-201ENST00000505681 714 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AC008694.2-201ENST00000517591 306 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.41□□□□□ -1.7
PRAMEP78395 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.41□□□□□ -1.7
PRAMEP78395 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.41□□□□□ -1.7
PRAMEP78395 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.41□□□□□ -1.7
PRAMEP78395 OR8K4P-201ENST00000534608 872 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.41□□□□□ -1.7
PRAMEP78395 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.41□□□□□ -1.7
PRAMEP78395 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.41□□□□□ -1.7
PRAMEP78395 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.41□□□□□ -1.7
PRAMEP78395 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.41□□□□□ -1.7
PRAMEP78395 AC084783.1-201ENST00000565846 910 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AC093519.1-201ENST00000566109 298 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 RPL23AP97-201ENST00000568955 471 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AC074051.3-201ENST00000570238 358 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 SNORD39.3-201ENST00000584451 71 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 YWHAQP7-201ENST00000603536 658 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AL035411.2-201ENST00000604022 421 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AC015813.4-201ENST00000610469 179 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 AP001002.2-201ENST00000625137 386 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 FAM157B-203ENST00000639350 358 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRAMEP78395 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRAMEP78395 AL355578.1-201ENST00000607405 1328 ntBASIC4.41□□□□□ -1.7
PRAMEP78395 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PRAMEP78395 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PRAMEP78395 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PRAMEP78395 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRAMEP78395 MTND5P28-201ENST00000438005 1594 ntBASIC4.4□□□□□ -1.7
PRAMEP78395 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRAMEP78395 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRAMEP78395 AC090229.1-201ENST00000590983 1609 ntBASIC4.4□□□□□ -1.7
PRAMEP78395 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PRAMEP78395 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRAMEP78395 RAD17P1-201ENST00000418130 2042 ntBASIC4.4□□□□□ -1.7
PRAMEP78395 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRAMEP78395 AC016588.2-201ENST00000632484 3021 ntBASIC4.4□□□□□ -1.71
PRAMEP78395 AC079741.1-201ENST00000321498 212 ntBASIC4.4□□□□□ -1.71
PRAMEP78395 RNA5SP52-201ENST00000362448 134 ntBASIC4.4□□□□□ -1.71
PRAMEP78395 RNU6-492P-201ENST00000363035 104 ntBASIC4.4□□□□□ -1.71
PRAMEP78395 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.4□□□□□ -1.71
PRAMEP78395 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PRAMEP78395 RPS3AP23-201ENST00000401762 784 ntBASIC4.4□□□□□ -1.71
PRAMEP78395 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PRAMEP78395 MIR1911-201ENST00000410783 80 ntBASIC4.4□□□□□ -1.71
PRAMEP78395 RN7SKP216-201ENST00000411050 312 ntBASIC4.4□□□□□ -1.71
PRAMEP78395 AC069218.2-201ENST00000411665 344 ntBASIC4.4□□□□□ -1.71
PRAMEP78395 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.4□□□□□ -1.71
PRAMEP78395 AL592310.1-201ENST00000414330 671 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms