Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.76□□□□□ -1.65
CLRN1P58418 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.76□□□□□ -1.65
CLRN1P58418 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.76□□□□□ -1.65
CLRN1P58418 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.76□□□□□ -1.65
CLRN1P58418 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.76□□□□□ -1.65
CLRN1P58418 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.76□□□□□ -1.65
CLRN1P58418 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.76□□□□□ -1.65
CLRN1P58418 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.76□□□□□ -1.65
CLRN1P58418 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.76□□□□□ -1.65
CLRN1P58418 MIR3614-201ENST00000581261 86 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.76□□□□□ -1.65
CLRN1P58418 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.76□□□□□ -1.65
CLRN1P58418 AC011451.2-201ENST00000604303 598 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 AC092954.2-201ENST00000609103 430 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.76□□□□□ -1.65
CLRN1P58418 AC074101.1-201ENST00000637861 241 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.76□□□□□ -1.65
CLRN1P58418 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.76□□□□□ -1.65
CLRN1P58418 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLRN1P58418 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLRN1P58418 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLRN1P58418 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLRN1P58418 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CLRN1P58418 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLRN1P58418 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.76□□□□□ -1.65
CLRN1P58418 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLRN1P58418 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CLRN1P58418 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CLRN1P58418 OR11H5P-202ENST00000641612 1325 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLRN1P58418 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLRN1P58418 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CLRN1P58418 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CLRN1P58418 AL022578.1-201ENST00000439330 1433 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.75□□□□□ -1.65
CLRN1P58418 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.75□□□□□ -1.65
CLRN1P58418 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLRN1P58418 MIR133B-201ENST00000362210 119 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 RNA5SP234-201ENST00000363916 119 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 Y_RNA.303-201ENST00000364998 94 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 MIR649-201ENST00000384843 97 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 SNORA48.4-201ENST00000391089 134 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 EIF5P1-201ENST00000400019 1231 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 Y_RNA.608-201ENST00000410647 95 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 RN7SKP293-201ENST00000411389 296 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.75□□□□□ -1.65
CLRN1P58418 AC233728.2-201ENST00000425348 757 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.75□□□□□ -1.65
CLRN1P58418 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLRN1P58418 AC023347.2-201ENST00000433994 462 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 AL450263.2-201ENST00000439400 589 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 RPL12P11-201ENST00000439970 501 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 ELOCP10-201ENST00000440624 327 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 RPL23AP16-201ENST00000441715 421 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 MTND6P13-201ENST00000443510 523 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 AP000281.1-201ENST00000444036 316 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.75□□□□□ -1.65
CLRN1P58418 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLRN1P58418 RPL7P22-201ENST00000466005 733 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLRN1P58418 RN7SL717P-201ENST00000478343 297 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.75□□□□□ -1.65
CLRN1P58418 FAM92A1P2-202ENST00000504766 877 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.75□□□□□ -1.65
CLRN1P58418 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.75□□□□□ -1.65
CLRN1P58418 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLRN1P58418 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.75□□□□□ -1.65
CLRN1P58418 RPL21P5-201ENST00000554662 472 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.75□□□□□ -1.65
CLRN1P58418 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.75□□□□□ -1.65
CLRN1P58418 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.75□□□□□ -1.65
CLRN1P58418 ELOCP34-201ENST00000604436 327 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 AC004067.1-201ENST00000608733 700 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 AC136475.10-201ENST00000620253 385 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLRN1P58418 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLRN1P58418 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLRN1P58418 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CLRN1P58418 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CLRN1P58418 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLRN1P58418 XPOTP1-201ENST00000443317 2398 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLRN1P58418 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.75□□□□□ -1.65
CLRN1P58418 AP002001.2-201ENST00000529025 1469 ntBASIC4.75□□□□□ -1.65
CLRN1P58418 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLRN1P58418 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CLRN1P58418 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLRN1P58418 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLRN1P58418 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
CLRN1P58418 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.74□□□□□ -1.65
CLRN1P58418 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLRN1P58418 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CLRN1P58418 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CLRN1P58418 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.74□□□□□ -1.65
CLRN1P58418 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CLRN1P58418 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLRN1P58418 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLRN1P58418 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLRN1P58418 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLRN1P58418 MIR323A-201ENST00000362199 86 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms