Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
GFRA1P56159 ZNF652P1-201ENST00000442420 1309 ntBASIC5.21□□□□□ -1.58
GFRA1P56159 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GFRA1P56159 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GFRA1P56159 AC007529.1-201ENST00000418574 2178 ntBASIC5.21□□□□□ -1.58
GFRA1P56159 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
GFRA1P56159 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GFRA1P56159 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GFRA1P56159 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GFRA1P56159 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GFRA1P56159 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GFRA1P56159 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GFRA1P56159 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
GFRA1P56159 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
GFRA1P56159 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GFRA1P56159 AC015799.1-201ENST00000622996 3122 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
GFRA1P56159 AL159987.1-201ENST00000347911 293 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 RNA5SP46-201ENST00000362370 120 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 RNA5SP258-201ENST00000362750 119 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 RN7SKP235-201ENST00000410662 305 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 RN7SKP206-201ENST00000410823 293 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 RN7SKP286-201ENST00000410894 299 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 AC211486.3-201ENST00000412694 621 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.2□□□□□ -1.58
GFRA1P56159 ELOCP4-201ENST00000420090 333 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 CHEK2P5-201ENST00000423877 246 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 AL513185.2-201ENST00000425543 193 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 OR2B7P-201ENST00000429302 934 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.2□□□□□ -1.58
GFRA1P56159 AL391987.1-201ENST00000441025 200 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 AP000281.1-201ENST00000444036 316 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 NOP56P2-201ENST00000447491 769 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 SNRPGP6-201ENST00000451124 220 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 RNU6-420P-201ENST00000458780 107 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 AP001992.1-205ENST00000462248 379 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 RN7SL570P-201ENST00000484405 292 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 AC114786.4-201ENST00000508771 728 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 AC074255.1-201ENST00000511259 501 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.2□□□□□ -1.58
GFRA1P56159 RN7SKP67-201ENST00000515905 235 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 AC021678.3-201ENST00000517893 476 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 AC112191.2-201ENST00000522428 333 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.2□□□□□ -1.58
GFRA1P56159 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.2□□□□□ -1.58
GFRA1P56159 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.2□□□□□ -1.58
GFRA1P56159 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
GFRA1P56159 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.2□□□□□ -1.58
GFRA1P56159 AC126615.2-201ENST00000553003 515 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 IGBP1P1-201ENST00000554337 1009 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 AC096996.1-201ENST00000563813 325 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.2□□□□□ -1.58
GFRA1P56159 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.2□□□□□ -1.58
GFRA1P56159 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.2□□□□□ -1.58
GFRA1P56159 C8orf59P2-201ENST00000603441 271 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 AL355472.4-201ENST00000610233 626 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 RN7SL787P-201ENST00000613000 284 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 AL596245.1-201ENST00000618994 362 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.2□□□□□ -1.58
GFRA1P56159 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.2□□□□□ -1.58
GFRA1P56159 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.2□□□□□ -1.58
GFRA1P56159 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.2□□□□□ -1.58
GFRA1P56159 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
GFRA1P56159 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
GFRA1P56159 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GFRA1P56159 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.2□□□□□ -1.58
GFRA1P56159 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GFRA1P56159 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GFRA1P56159 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.2□□□□□ -1.58
GFRA1P56159 MTND5P33-201ENST00000571250 1450 ntBASIC5.2□□□□□ -1.58
GFRA1P56159 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
GFRA1P56159 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.19□□□□□ -1.58
GFRA1P56159 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.19□□□□□ -1.58
GFRA1P56159 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.19□□□□□ -1.58
GFRA1P56159 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
GFRA1P56159 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
GFRA1P56159 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GFRA1P56159 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
GFRA1P56159 SNORA64.1-201ENST00000362600 132 ntBASIC5.19□□□□□ -1.58
GFRA1P56159 RNU1-59P-201ENST00000364829 162 ntBASIC5.19□□□□□ -1.58
GFRA1P56159 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
GFRA1P56159 MT-TD-201ENST00000387419 68 ntBASIC5.19□□□□□ -1.58
GFRA1P56159 U3.20-201ENST00000390909 217 ntBASIC5.19□□□□□ -1.58
GFRA1P56159 BMS1P17-202ENST00000416720 316 ntBASIC5.19□□□□□ -1.58
GFRA1P56159 AL358176.3-201ENST00000420757 454 ntBASIC5.19□□□□□ -1.58
GFRA1P56159 AL662874.1-201ENST00000426065 230 ntBASIC5.19□□□□□ -1.58
GFRA1P56159 AC006548.1-201ENST00000427470 102 ntBASIC5.19□□□□□ -1.58
GFRA1P56159 AL136231.1-201ENST00000429407 730 ntBASIC5.19□□□□□ -1.58
GFRA1P56159 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.19□□□□□ -1.58
GFRA1P56159 CEACAMP1-201ENST00000434624 1035 ntBASIC5.19□□□□□ -1.58
GFRA1P56159 AL356276.2-201ENST00000435919 558 ntBASIC5.19□□□□□ -1.58
GFRA1P56159 SEPT14P3-201ENST00000439401 183 ntBASIC5.19□□□□□ -1.58
GFRA1P56159 AL732372.2-207ENST00000445840 183 ntBASIC5.19□□□□□ -1.58
GFRA1P56159 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms