Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS2P54868 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS2P54868 RNU1-108P-201ENST00000362556 161 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 RNU4-35P-201ENST00000362588 141 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGCS2P54868 NDUFB4P4-201ENST00000404822 243 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 RNU6-603P-201ENST00000411403 107 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGCS2P54868 MTND4P24-201ENST00000424002 397 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 HIGD1AP12-201ENST00000427832 281 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 AC011742.1-201ENST00000431448 434 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 AL606490.7-201ENST00000433136 191 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 AC245517.2-201ENST00000442890 346 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCS2P54868 AC010655.1-201ENST00000449336 292 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 AC115115.1-201ENST00000449927 248 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 SETP6-201ENST00000479329 568 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 METTL15P1-201ENST00000481421 1045 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 HMGB3P13-201ENST00000511263 607 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 AP000889.1-201ENST00000530968 660 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.21□□□□□ -1.74
HMGCS2P54868 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCS2P54868 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCS2P54868 MIR5186-201ENST00000577504 120 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGCS2P54868 MTCO2P22-201ENST00000603246 681 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 AC079880.2-201ENST00000603790 1213 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGCS2P54868 AC131238.1-201ENST00000617135 328 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 AC069209.1-201ENST00000619282 651 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGCS2P54868 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS2P54868 AL512283.1-201ENST00000606756 1384 ntBASIC4.21□□□□□ -1.74
HMGCS2P54868 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS2P54868 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS2P54868 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS2P54868 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HMGCS2P54868 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS2P54868 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS2P54868 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.21□□□□□ -1.74
HMGCS2P54868 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCS2P54868 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS2P54868 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HMGCS2P54868 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS2P54868 AC011155.1-201ENST00000316512 456 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 RNU6-304P-201ENST00000364855 107 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS2P54868 AL356057.1-202ENST00000402263 756 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 RNA5SP120-201ENST00000410900 112 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGCS2P54868 MORF4L1P7-201ENST00000426038 703 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 AC005300.1-201ENST00000428401 373 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGCS2P54868 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGCS2P54868 AL357520.1-201ENST00000441557 453 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 TPTE2P3-201ENST00000441562 1189 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGCS2P54868 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGCS2P54868 TRBV12-2-201ENST00000489763 344 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGCS2P54868 ARL4AP1-201ENST00000503220 705 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS2P54868 MTND3P24-201ENST00000506306 329 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 AC093770.1-201ENST00000511559 571 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGCS2P54868 AP003049.1-201ENST00000529418 457 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS2P54868 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.2□□□□□ -1.74
HMGCS2P54868 PDCD5P1-201ENST00000543528 309 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 AL136520.1-202ENST00000555494 763 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 MTND4LP25-201ENST00000570218 163 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGCS2P54868 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.2□□□□□ -1.74
HMGCS2P54868 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS2P54868 AL671309.1-201ENST00000603750 544 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS2P54868 AL450270.1-201ENST00000606160 391 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 AC242628.1-201ENST00000606810 391 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 MIR7851-201ENST00000610611 160 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 AC025016.1-201ENST00000616746 682 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS2P54868 AP002371.2-201ENST00000624450 503 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGCS2P54868 AL596275.2-204ENST00000641628 552 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 AL596275.2-206ENST00000641957 626 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGCS2P54868 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGCS2P54868 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS2P54868 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS2P54868 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCS2P54868 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGCS2P54868 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGCS2P54868 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
HMGCS2P54868 AL133383.2-201ENST00000622958 2336 ntBASIC4.2□□□□□ -1.74
HMGCS2P54868 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS2P54868 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HMGCS2P54868 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HMGCS2P54868 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS2P54868 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS2P54868 AC009501.3-201ENST00000605001 1352 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms