Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC136618.2-201ENST00000575091 400 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AP001004.1-201ENST00000582468 324 ntBASIC4.33□□□□□ -1.72
SOX2P48431 SNORD39.3-201ENST00000584451 71 ntBASIC4.33□□□□□ -1.72
SOX2P48431 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.33□□□□□ -1.72
SOX2P48431 AC008521.2-201ENST00000591021 259 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC092354.2-201ENST00000607786 514 ntBASIC4.33□□□□□ -1.72
SOX2P48431 RNA5SP440-201ENST00000612665 119 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC116447.1-201ENST00000613153 453 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.33□□□□□ -1.72
SOX2P48431 AC015540.1-201ENST00000615828 501 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC123768.4-201ENST00000616244 701 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC099842.1-201ENST00000619919 596 ntBASIC4.33□□□□□ -1.72
SOX2P48431 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.33□□□□□ -1.72
SOX2P48431 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC127024.6-201ENST00000621598 424 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC015908.5-201ENST00000623289 343 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.33□□□□□ -1.72
SOX2P48431 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SOX2P48431 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.33□□□□□ -1.72
SOX2P48431 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SOX2P48431 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SOX2P48431 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SOX2P48431 AC011493.1-201ENST00000596753 1632 ntBASIC4.32□□□□□ -1.72
SOX2P48431 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.32□□□□□ -1.72
SOX2P48431 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SOX2P48431 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SOX2P48431 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.32□□□□□ -1.72
SOX2P48431 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SOX2P48431 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SOX2P48431 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SOX2P48431 RNU6-1119P-201ENST00000384349 108 ntBASIC4.32□□□□□ -1.72
SOX2P48431 RNU6-178P-201ENST00000384631 104 ntBASIC4.32□□□□□ -1.72
SOX2P48431 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SOX2P48431 DEFB108C-201ENST00000400154 252 ntBASIC4.32□□□□□ -1.72
SOX2P48431 AC007899.1-201ENST00000412776 775 ntBASIC4.32□□□□□ -1.72
SOX2P48431 ATG4AP1-201ENST00000416893 538 ntBASIC4.32□□□□□ -1.72
SOX2P48431 AC009302.1-201ENST00000417147 390 ntBASIC4.32□□□□□ -1.72
SOX2P48431 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SOX2P48431 AC004448.2-201ENST00000422360 586 ntBASIC4.32□□□□□ -1.72
SOX2P48431 IPMKP1-201ENST00000425988 855 ntBASIC4.32□□□□□ -1.72
SOX2P48431 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.32□□□□□ -1.72
SOX2P48431 RPL7L1P9-201ENST00000431298 745 ntBASIC4.32□□□□□ -1.72
SOX2P48431 RPS29P9-201ENST00000440360 171 ntBASIC4.32□□□□□ -1.72
SOX2P48431 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.32□□□□□ -1.72
SOX2P48431 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.32□□□□□ -1.72
SOX2P48431 USP9YP29-201ENST00000445112 563 ntBASIC4.32□□□□□ -1.72
SOX2P48431 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.32□□□□□ -1.72
SOX2P48431 EPS15P1-201ENST00000448836 336 ntBASIC4.32□□□□□ -1.72
SOX2P48431 TCEA1P1-201ENST00000449716 880 ntBASIC4.32□□□□□ -1.72
SOX2P48431 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.32□□□□□ -1.72
SOX2P48431 OR52E7P-201ENST00000452394 933 ntBASIC4.32□□□□□ -1.72
SOX2P48431 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SOX2P48431 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SOX2P48431 SUMO2P2-201ENST00000456482 255 ntBASIC4.32□□□□□ -1.72
SOX2P48431 RN7SL184P-201ENST00000488308 297 ntBASIC4.32□□□□□ -1.72
SOX2P48431 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.32□□□□□ -1.72
SOX2P48431 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.32□□□□□ -1.72
SOX2P48431 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.32□□□□□ -1.72
SOX2P48431 AC116347.2-201ENST00000514912 523 ntBASIC4.32□□□□□ -1.72
SOX2P48431 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.32□□□□□ -1.72
SOX2P48431 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.32□□□□□ -1.72
SOX2P48431 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.32□□□□□ -1.72
SOX2P48431 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.32□□□□□ -1.72
SOX2P48431 AL389895.1-201ENST00000554127 252 ntBASIC4.32□□□□□ -1.72
SOX2P48431 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.32□□□□□ -1.72
SOX2P48431 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.32□□□□□ -1.72
SOX2P48431 NF1P5-201ENST00000588287 448 ntBASIC4.32□□□□□ -1.72
SOX2P48431 AC087683.1-201ENST00000591187 441 ntBASIC4.32□□□□□ -1.72
SOX2P48431 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SOX2P48431 AC104687.2-201ENST00000604442 342 ntBASIC4.32□□□□□ -1.72
SOX2P48431 AC107214.2-201ENST00000608204 634 ntBASIC4.32□□□□□ -1.72
SOX2P48431 AC005332.10-201ENST00000612725 619 ntBASIC4.32□□□□□ -1.72
SOX2P48431 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SOX2P48431 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SOX2P48431 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.32□□□□□ -1.72
SOX2P48431 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.32□□□□□ -1.72
SOX2P48431 AC009229.4-201ENST00000623854 1947 ntBASIC4.32□□□□□ -1.72
SOX2P48431 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SOX2P48431 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.32□□□□□ -1.72
SOX2P48431 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.32□□□□□ -1.72
SOX2P48431 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.32□□□□□ -1.72
SOX2P48431 AL034370.1-201ENST00000397254 1590 ntBASIC4.31□□□□□ -1.72
SOX2P48431 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.31□□□□□ -1.72
SOX2P48431 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
SOX2P48431 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX2P48431 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX2P48431 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX2P48431 RNU6-984P-201ENST00000363236 109 ntBASIC4.31□□□□□ -1.72
SOX2P48431 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SOX2P48431 Y_RNA.517-201ENST00000384551 106 ntBASIC4.31□□□□□ -1.72
SOX2P48431 MIR621-201ENST00000384919 96 ntBASIC4.31□□□□□ -1.72
SOX2P48431 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.31□□□□□ -1.72
SOX2P48431 RNU6-603P-201ENST00000411403 107 ntBASIC4.31□□□□□ -1.72
SOX2P48431 RPL35AP24-201ENST00000413846 330 ntBASIC4.31□□□□□ -1.72
SOX2P48431 RPS7P13-201ENST00000413955 498 ntBASIC4.31□□□□□ -1.72
SOX2P48431 OR5BE1P-201ENST00000425977 939 ntBASIC4.31□□□□□ -1.72
SOX2P48431 AL512649.1-201ENST00000428997 581 ntBASIC4.31□□□□□ -1.72
SOX2P48431 FABP7P2-201ENST00000429946 379 ntBASIC4.31□□□□□ -1.72
SOX2P48431 ZYG11AP1-201ENST00000430329 837 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms