Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC006511.1-201ENST00000470614 315 ntBASIC3.58□□□□□ -1.84
RPA3P35244 AC087312.1-201ENST00000471411 480 ntBASIC3.58□□□□□ -1.84
RPA3P35244 RPS4XP22-201ENST00000480755 780 ntBASIC3.58□□□□□ -1.84
RPA3P35244 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.58□□□□□ -1.84
RPA3P35244 RNU6-579P-201ENST00000516879 102 ntBASIC3.58□□□□□ -1.84
RPA3P35244 RNU1-45P-201ENST00000517191 141 ntBASIC3.58□□□□□ -1.84
RPA3P35244 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.58□□□□□ -1.84
RPA3P35244 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.58□□□□□ -1.84
RPA3P35244 ABI1P1-201ENST00000603375 1120 ntBASIC3.58□□□□□ -1.84
RPA3P35244 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.58□□□□□ -1.84
RPA3P35244 AL589935.2-201ENST00000616471 1231 ntBASIC3.58□□□□□ -1.84
RPA3P35244 AP003072.4-201ENST00000624580 310 ntBASIC3.58□□□□□ -1.84
RPA3P35244 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPA3P35244 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.58□□□□□ -1.84
RPA3P35244 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPA3P35244 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPA3P35244 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RPA3P35244 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
RPA3P35244 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.58□□□□□ -1.84
RPA3P35244 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPA3P35244 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPA3P35244 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
RPA3P35244 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.57□□□□□ -1.84
RPA3P35244 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RPA3P35244 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RPA3P35244 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPA3P35244 AC007685.1-201ENST00000329806 452 ntBASIC3.57□□□□□ -1.84
RPA3P35244 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.57□□□□□ -1.84
RPA3P35244 RNU6-666P-201ENST00000363499 107 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AC013404.1-201ENST00000413068 249 ntBASIC3.57□□□□□ -1.84
RPA3P35244 RPS7P13-201ENST00000413955 498 ntBASIC3.57□□□□□ -1.84
RPA3P35244 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.57□□□□□ -1.84
RPA3P35244 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.57□□□□□ -1.84
RPA3P35244 AL445584.1-201ENST00000431451 330 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AC007389.2-201ENST00000434630 306 ntBASIC3.57□□□□□ -1.84
RPA3P35244 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.57□□□□□ -1.84
RPA3P35244 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.57□□□□□ -1.84
RPA3P35244 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.57□□□□□ -1.84
RPA3P35244 NOTCH2P1-201ENST00000443481 624 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AL353898.1-201ENST00000444055 238 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AL359073.1-201ENST00000448036 403 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AC010655.1-201ENST00000449336 292 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.57□□□□□ -1.84
RPA3P35244 RPL12P26-201ENST00000452430 487 ntBASIC3.57□□□□□ -1.84
RPA3P35244 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RPA3P35244 AC020898.1-201ENST00000474167 787 ntBASIC3.57□□□□□ -1.84
RPA3P35244 S100A11P1-201ENST00000477525 312 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AP000926.1-201ENST00000479573 241 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.57□□□□□ -1.84
RPA3P35244 UBE2CP3-201ENST00000502715 450 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.57□□□□□ -1.84
RPA3P35244 RNU2-27P-201ENST00000516185 142 ntBASIC3.57□□□□□ -1.84
RPA3P35244 RNU6-1308P-201ENST00000516817 103 ntBASIC3.57□□□□□ -1.84
RPA3P35244 MIR2276-201ENST00000516886 89 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.57□□□□□ -1.84
RPA3P35244 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.57□□□□□ -1.84
RPA3P35244 RFPL1S-203ENST00000539579 330 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AC008083.2-201ENST00000546707 476 ntBASIC3.57□□□□□ -1.84
RPA3P35244 DUXAP6-201ENST00000553858 601 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.57□□□□□ -1.84
RPA3P35244 AGGF1P8-201ENST00000562979 1000 ntBASIC3.57□□□□□ -1.84
RPA3P35244 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.57□□□□□ -1.84
RPA3P35244 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPA3P35244 AC090229.1-201ENST00000590983 1609 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AL049634.3-201ENST00000604968 457 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AC005021.1-201ENST00000608730 355 ntBASIC3.57□□□□□ -1.84
RPA3P35244 OR6R2P-201ENST00000609216 300 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AC243654.2-201ENST00000612843 443 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AL356863.1-201ENST00000623378 1080 ntBASIC3.57□□□□□ -1.84
RPA3P35244 AC019080.5-201ENST00000624891 757 ntBASIC3.57□□□□□ -1.84
RPA3P35244 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPA3P35244 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPA3P35244 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RPA3P35244 AC007529.1-201ENST00000418574 2178 ntBASIC3.56□□□□□ -1.84
RPA3P35244 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RPA3P35244 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.56□□□□□ -1.84
RPA3P35244 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
RPA3P35244 U8.11-201ENST00000384699 133 ntBASIC3.56□□□□□ -1.84
RPA3P35244 U8.12-201ENST00000384701 133 ntBASIC3.56□□□□□ -1.84
RPA3P35244 RN7SKP177-201ENST00000410567 355 ntBASIC3.56□□□□□ -1.84
RPA3P35244 RPL36AP36-201ENST00000418616 301 ntBASIC3.56□□□□□ -1.84
RPA3P35244 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.56□□□□□ -1.84
RPA3P35244 RPL30P3-201ENST00000424262 333 ntBASIC3.56□□□□□ -1.84
RPA3P35244 AL035246.1-201ENST00000433554 1255 ntBASIC3.56□□□□□ -1.84
RPA3P35244 U8.18-201ENST00000459285 133 ntBASIC3.56□□□□□ -1.84
RPA3P35244 RPL23AP12-201ENST00000467573 473 ntBASIC3.56□□□□□ -1.84
RPA3P35244 RN7SL442P-201ENST00000473804 320 ntBASIC3.56□□□□□ -1.84
RPA3P35244 AP000563.1-201ENST00000490865 758 ntBASIC3.56□□□□□ -1.84
RPA3P35244 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.56□□□□□ -1.84
RPA3P35244 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.56□□□□□ -1.84
RPA3P35244 AP000926.4-201ENST00000527351 454 ntBASIC3.56□□□□□ -1.84
RPA3P35244 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RPA3P35244 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.56□□□□□ -1.84
RPA3P35244 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.56□□□□□ -1.84
RPA3P35244 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
RPA3P35244 AC008507.1-201ENST00000587506 734 ntBASIC3.56□□□□□ -1.84
RPA3P35244 AP003117.1-201ENST00000602771 554 ntBASIC3.56□□□□□ -1.84
RPA3P35244 AC112230.1-201ENST00000604342 547 ntBASIC3.56□□□□□ -1.84
RPA3P35244 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.56□□□□□ -1.84
RPA3P35244 HMGB1P51-201ENST00000605166 638 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms