Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.36□□□□□ -1.71
CTNNA1P35221 OR51B8P-201ENST00000449892 769 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 RPL36AP13-201ENST00000457490 317 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 RPL35P6-201ENST00000490024 372 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 RPL23AP72-201ENST00000492447 435 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 AP001086.1-201ENST00000494882 321 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 AC109458.1-201ENST00000508858 316 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.36□□□□□ -1.71
CTNNA1P35221 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.36□□□□□ -1.71
CTNNA1P35221 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.36□□□□□ -1.71
CTNNA1P35221 IGKV2-38-201ENST00000517443 247 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
CTNNA1P35221 OR5D17P-201ENST00000531492 978 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTNNA1P35221 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.36□□□□□ -1.71
CTNNA1P35221 AC092470.1-201ENST00000546187 132 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CTNNA1P35221 AC068831.4-201ENST00000556118 109 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 AC051619.2-201ENST00000559063 397 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.36□□□□□ -1.71
CTNNA1P35221 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.36□□□□□ -1.71
CTNNA1P35221 MTCO1P40-201ENST00000574371 625 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.36□□□□□ -1.71
CTNNA1P35221 HMGB1P50-201ENST00000605814 607 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 AP005229.2-201ENST00000609980 697 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.36□□□□□ -1.71
CTNNA1P35221 AL355578.1-201ENST00000607405 1328 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTNNA1P35221 SGO1P1-201ENST00000603525 1447 ntBASIC4.36□□□□□ -1.71
CTNNA1P35221 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTNNA1P35221 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTNNA1P35221 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNA1P35221 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNA1P35221 AC010300.1-201ENST00000600671 5134 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CTNNA1P35221 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.35□□□□□ -1.71
CTNNA1P35221 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNA1P35221 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNA1P35221 SNORA7.2-201ENST00000364446 145 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 RNU6-335P-201ENST00000364563 113 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 RNA5SP505-201ENST00000364748 108 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 RNU6-354P-201ENST00000383862 107 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 RNU6-610P-201ENST00000384264 107 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 RNU6-441P-201ENST00000384545 106 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.35□□□□□ -1.71
CTNNA1P35221 AC119751.6-201ENST00000416712 186 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 AL391219.1-201ENST00000422570 483 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 MTCO1P54-201ENST00000430139 712 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 AC011742.1-201ENST00000431448 434 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.35□□□□□ -1.71
CTNNA1P35221 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA1P35221 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA1P35221 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA1P35221 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA1P35221 CYCSP53-201ENST00000455540 265 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 AC069499.1-201ENST00000489433 509 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 AK3P4-201ENST00000504283 583 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 RNA5SP49-201ENST00000516450 115 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 RN7SKP92-201ENST00000517266 244 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA1P35221 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.35□□□□□ -1.71
CTNNA1P35221 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA1P35221 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA1P35221 CYP2C60P-201ENST00000566088 139 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.35□□□□□ -1.71
CTNNA1P35221 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.35□□□□□ -1.71
CTNNA1P35221 AL020997.3-201ENST00000602843 359 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 AC008536.1-201ENST00000602872 669 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 IGHV3-29-201ENST00000604817 344 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 AC024940.4-201ENST00000605507 246 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.35□□□□□ -1.71
CTNNA1P35221 MIR4278-201ENST00000636094 69 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNA1P35221 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTNNA1P35221 MTND5P31-201ENST00000419366 1374 ntBASIC4.35□□□□□ -1.71
CTNNA1P35221 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.35□□□□□ -1.71
CTNNA1P35221 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.35□□□□□ -1.71
CTNNA1P35221 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CTNNA1P35221 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA1P35221 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CTNNA1P35221 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNA1P35221 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNA1P35221 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA1P35221 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA1P35221 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNA1P35221 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA1P35221 RNU1-89P-201ENST00000384592 164 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 MIR607-201ENST00000385241 96 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA1P35221 SFR1P1-201ENST00000403720 688 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 RN7SKP56-201ENST00000410513 331 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 PGBD4P8-201ENST00000412993 562 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNA1P35221 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNA1P35221 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA1P35221 RPL21P112-201ENST00000434403 463 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 AC234064.1-201ENST00000436312 247 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 AF228730.2-201ENST00000438784 848 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms