Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RN7SKP159-201ENST00000410657 292 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 SNORA57.3-201ENST00000411095 141 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 XKRYP4-201ENST00000414395 483 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 LINC01881-201ENST00000416103 412 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.72□□□□□ -1.81
SHMT2P34897 MTCO3P4-201ENST00000419236 787 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 AL365396.1-201ENST00000430854 671 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SHMT2P34897 AL035458.1-201ENST00000433096 585 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.72□□□□□ -1.81
SHMT2P34897 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.72□□□□□ -1.81
SHMT2P34897 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.72□□□□□ -1.81
SHMT2P34897 XKRYP5-201ENST00000449659 483 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.72□□□□□ -1.81
SHMT2P34897 RPS20P21-201ENST00000466859 343 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.72□□□□□ -1.81
SHMT2P34897 AP000926.1-201ENST00000479573 241 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHMT2P34897 AC106872.2-201ENST00000494303 480 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 AC068305.1-201ENST00000497406 726 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 AC004069.2-201ENST00000505438 1114 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.72□□□□□ -1.81
SHMT2P34897 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.72□□□□□ -1.81
SHMT2P34897 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHMT2P34897 AC087272.1-201ENST00000523624 533 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.72□□□□□ -1.81
SHMT2P34897 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.72□□□□□ -1.81
SHMT2P34897 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.72□□□□□ -1.81
SHMT2P34897 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.72□□□□□ -1.81
SHMT2P34897 CBX3P5-201ENST00000552017 521 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.72□□□□□ -1.81
SHMT2P34897 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.72□□□□□ -1.81
SHMT2P34897 AL133457.1-201ENST00000564251 987 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 MIR4716-201ENST00000579628 84 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.72□□□□□ -1.81
SHMT2P34897 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHMT2P34897 AC011374.2-201ENST00000607135 526 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHMT2P34897 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHMT2P34897 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHMT2P34897 AC024023.1-201ENST00000624530 922 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 AC244205.2-202ENST00000635781 342 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 ATE1-AS1-202ENST00000636460 506 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.72□□□□□ -1.81
SHMT2P34897 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SHMT2P34897 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SHMT2P34897 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.72□□□□□ -1.81
SHMT2P34897 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.72□□□□□ -1.81
SHMT2P34897 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.72□□□□□ -1.81
SHMT2P34897 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
SHMT2P34897 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SHMT2P34897 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SHMT2P34897 CR381670.1-201ENST00000624291 1693 ntBASIC3.71□□□□□ -1.81
SHMT2P34897 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.81
SHMT2P34897 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
SHMT2P34897 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
SHMT2P34897 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHMT2P34897 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHMT2P34897 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.71□□□□□ -1.82
SHMT2P34897 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHMT2P34897 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
SHMT2P34897 RNU2-17P-201ENST00000410290 190 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 RN7SKP156-201ENST00000410308 342 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 RN7SKP202-201ENST00000410439 330 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.71□□□□□ -1.82
SHMT2P34897 RPL30P2-201ENST00000414021 291 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHMT2P34897 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.71□□□□□ -1.82
SHMT2P34897 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.71□□□□□ -1.82
SHMT2P34897 AL390879.2-203ENST00000426943 1121 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.71□□□□□ -1.82
SHMT2P34897 Z74696.2-201ENST00000436514 498 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.71□□□□□ -1.82
SHMT2P34897 AL359073.1-201ENST00000448036 403 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.71□□□□□ -1.82
SHMT2P34897 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.71□□□□□ -1.82
SHMT2P34897 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.71□□□□□ -1.82
SHMT2P34897 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.71□□□□□ -1.82
SHMT2P34897 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.71□□□□□ -1.82
SHMT2P34897 RNU6-352P-201ENST00000516908 107 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.71□□□□□ -1.82
SHMT2P34897 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.71□□□□□ -1.82
SHMT2P34897 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHMT2P34897 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.71□□□□□ -1.82
SHMT2P34897 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SHMT2P34897 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SHMT2P34897 OR4C2P-201ENST00000530855 1064 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 AP002812.4-201ENST00000532139 286 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.71□□□□□ -1.82
SHMT2P34897 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHMT2P34897 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.71□□□□□ -1.82
SHMT2P34897 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.71□□□□□ -1.82
SHMT2P34897 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.71□□□□□ -1.82
SHMT2P34897 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.71□□□□□ -1.82
SHMT2P34897 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.71□□□□□ -1.82
SHMT2P34897 ZNF92P3-201ENST00000596594 954 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 EIF1P6-201ENST00000600054 334 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 Z82195.1-201ENST00000604558 398 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 KATNBL1P5-201ENST00000605015 517 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms