Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CNGA1P29973 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CNGA1P29973 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CNGA1P29973 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CNGA1P29973 SNORD116-9-201ENST00000384000 95 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 SNORD116-3-201ENST00000384287 95 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 SNORD116-7-201ENST00000384404 95 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 SNORD116-5-201ENST00000384462 95 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 CYCSP45-201ENST00000402289 315 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 ZNF603P-201ENST00000405613 487 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 RPL30P3-201ENST00000424262 333 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.64□□□□□ -1.51
CNGA1P29973 AC096632.1-201ENST00000427395 310 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.64□□□□□ -1.51
CNGA1P29973 AL590103.1-201ENST00000434488 307 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 AC093414.1-201ENST00000434712 514 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 SLC25A18P1-201ENST00000449385 454 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.64□□□□□ -1.51
CNGA1P29973 AC073387.1-201ENST00000453261 709 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 USP9YP10-201ENST00000454868 628 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 APOOP2-201ENST00000461561 539 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 RPL7P1-201ENST00000468161 747 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 RPL7P9-201ENST00000468715 747 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 AC010301.1-201ENST00000473936 355 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.64□□□□□ -1.51
CNGA1P29973 AC082651.2-201ENST00000496833 166 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 MTCYBP17-201ENST00000503579 789 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 MTATP6P22-201ENST00000507369 598 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 USP9YP5-201ENST00000511770 630 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 SNORD116-26-201ENST00000516006 96 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.64□□□□□ -1.51
CNGA1P29973 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CNGA1P29973 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.64□□□□□ -1.51
CNGA1P29973 OR7K1P-201ENST00000546439 926 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CNGA1P29973 AL390334.1-201ENST00000556395 450 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 AC084757.1-201ENST00000559987 490 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 AGGF1P8-201ENST00000562979 1000 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 MIR4504-201ENST00000577413 92 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 MIR3915-201ENST00000578518 97 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 AC022884.2-201ENST00000578535 580 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.64□□□□□ -1.51
CNGA1P29973 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.64□□□□□ -1.51
CNGA1P29973 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.64□□□□□ -1.51
CNGA1P29973 AL022161.1-201ENST00000604390 213 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 AP005432.2-201ENST00000608162 586 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 AC091931.1-201ENST00000623488 728 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 AC091965.5-201ENST00000624785 342 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CNGA1P29973 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.64□□□□□ -1.51
CNGA1P29973 AL450345.1-202ENST00000605741 3881 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CNGA1P29973 AC010928.1-201ENST00000592477 1447 ntBASIC5.64□□□□□ -1.51
CNGA1P29973 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
CNGA1P29973 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CNGA1P29973 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNGA1P29973 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CNGA1P29973 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNGA1P29973 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CNGA1P29973 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.63□□□□□ -1.51
CNGA1P29973 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.63□□□□□ -1.51
CNGA1P29973 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.63□□□□□ -1.51
CNGA1P29973 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CNGA1P29973 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CNGA1P29973 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CNGA1P29973 RNU6-500P-201ENST00000362349 107 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 SNORA2.3-201ENST00000383920 135 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 SNORA70.10-201ENST00000384515 134 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.63□□□□□ -1.51
CNGA1P29973 AL031577.2-201ENST00000404133 280 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 AL021407.1-201ENST00000404531 386 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 RPL12P9-201ENST00000412942 488 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 NUP35P2-201ENST00000416748 943 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 LINC00993-201ENST00000420453 540 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.63□□□□□ -1.51
CNGA1P29973 AC073335.1-201ENST00000427776 363 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 NRBF2P3-201ENST00000432731 865 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 AL359265.2-201ENST00000434367 631 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 RPL23AP16-201ENST00000441715 421 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 ARL2BPP10-201ENST00000446487 531 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.63□□□□□ -1.51
CNGA1P29973 RPL23AP35-201ENST00000451906 501 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.63□□□□□ -1.51
CNGA1P29973 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.63□□□□□ -1.51
CNGA1P29973 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.63□□□□□ -1.51
CNGA1P29973 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.63□□□□□ -1.51
CNGA1P29973 AC005726.1-201ENST00000494679 427 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 SNX5P1-201ENST00000505757 1041 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.63□□□□□ -1.51
CNGA1P29973 MTCYBP37-201ENST00000510642 1133 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 LTV1P1-201ENST00000510683 1237 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.63□□□□□ -1.51
CNGA1P29973 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.63□□□□□ -1.51
CNGA1P29973 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.63□□□□□ -1.51
CNGA1P29973 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 AC007954.1-201ENST00000554198 494 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.63□□□□□ -1.51
CNGA1P29973 AC136624.4-201ENST00000573044 370 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms