Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CD40LGP29965 SNORA60-201ENST00000362396 134 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 RNA5SP295-201ENST00000362655 121 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 SNORA73.2-201ENST00000364946 201 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 MIR591-201ENST00000385290 95 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CD40LGP29965 RNU2-21P-201ENST00000410368 188 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 ELOCP19-201ENST00000411919 318 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 AC016397.1-201ENST00000412463 242 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.39□□□□□ -1.87
CD40LGP29965 AL160175.1-201ENST00000428124 247 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 HMGB1P12-201ENST00000438594 598 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 Z99127.2-201ENST00000441426 334 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.39□□□□□ -1.87
CD40LGP29965 AP002884.2-201ENST00000471647 395 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 NDUFA5P9-201ENST00000472609 340 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 NCOR1P1-202ENST00000486162 291 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.39□□□□□ -1.87
CD40LGP29965 FCF1P3-201ENST00000496394 590 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 AC021146.5-201ENST00000503544 545 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.39□□□□□ -1.87
CD40LGP29965 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.39□□□□□ -1.87
CD40LGP29965 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.39□□□□□ -1.87
CD40LGP29965 RN7SKP277-201ENST00000516895 283 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.39□□□□□ -1.87
CD40LGP29965 AC105233.3-201ENST00000531125 744 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 AC006518.1-201ENST00000541449 943 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.39□□□□□ -1.87
CD40LGP29965 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.39□□□□□ -1.87
CD40LGP29965 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.39□□□□□ -1.87
CD40LGP29965 AC090616.5-202ENST00000582111 297 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 KPNA2P3-201ENST00000584190 848 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.39□□□□□ -1.87
CD40LGP29965 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.39□□□□□ -1.87
CD40LGP29965 AL137849.1-201ENST00000604767 169 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.39□□□□□ -1.87
CD40LGP29965 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.39□□□□□ -1.87
CD40LGP29965 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.39□□□□□ -1.87
CD40LGP29965 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.39□□□□□ -1.87
CD40LGP29965 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CD40LGP29965 FAM157B-203ENST00000639350 358 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 AC139713.2-214ENST00000642059 1811 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 AL672296.1-201ENST00000427780 2158 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD40LGP29965 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD40LGP29965 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CD40LGP29965 AC116667.1-201ENST00000604855 2072 ntBASIC3.39□□□□□ -1.87
CD40LGP29965 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CD40LGP29965 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CD40LGP29965 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.38□□□□□ -1.87
CD40LGP29965 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.38□□□□□ -1.87
CD40LGP29965 RNA5SP509-201ENST00000364577 119 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CD40LGP29965 AC108032.1-201ENST00000416706 207 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 RPL23AP38-201ENST00000423801 469 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.38□□□□□ -1.87
CD40LGP29965 AC023141.6-201ENST00000429418 337 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 RPL34P26-201ENST00000445636 354 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.38□□□□□ -1.87
CD40LGP29965 CYCSP42-201ENST00000450823 238 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 RNA5SP246-201ENST00000458909 119 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 AC092691.2-201ENST00000461787 803 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 AC011276.1-201ENST00000469688 323 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.38□□□□□ -1.87
CD40LGP29965 AC084198.1-201ENST00000477747 402 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 AL161747.1-201ENST00000480068 358 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.38□□□□□ -1.87
CD40LGP29965 RPL35P6-201ENST00000490024 372 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.38□□□□□ -1.87
CD40LGP29965 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.38□□□□□ -1.87
CD40LGP29965 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.38□□□□□ -1.87
CD40LGP29965 AC010476.1-201ENST00000519111 851 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.38□□□□□ -1.87
CD40LGP29965 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.38□□□□□ -1.87
CD40LGP29965 SYF2P1-201ENST00000550658 413 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.38□□□□□ -1.87
CD40LGP29965 AC074029.1-201ENST00000552531 1044 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.38□□□□□ -1.87
CD40LGP29965 PSMB7P1-201ENST00000556349 514 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CD40LGP29965 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.38□□□□□ -1.87
CD40LGP29965 AC245128.3-201ENST00000594721 748 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.38□□□□□ -1.87
CD40LGP29965 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.38□□□□□ -1.87
CD40LGP29965 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 AL139254.3-201ENST00000641097 674 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 MTCO1P8-201ENST00000416914 1523 ntBASIC3.38□□□□□ -1.87
CD40LGP29965 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CD40LGP29965 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CD40LGP29965 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CD40LGP29965 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CD40LGP29965 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
CD40LGP29965 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CD40LGP29965 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.37□□□□□ -1.87
CD40LGP29965 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD40LGP29965 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.37□□□□□ -1.87
CD40LGP29965 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CD40LGP29965 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD40LGP29965 AP002001.2-201ENST00000529025 1469 ntBASIC3.37□□□□□ -1.87
CD40LGP29965 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms