Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 SNORD14.1-201ENST00000365609 90 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 MT-TP-201ENST00000387461 68 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 EIF4E2P1-201ENST00000393781 255 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 AL121835.1-201ENST00000404250 354 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 MIR548H3-201ENST00000408771 118 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 RAC1P3-201ENST00000416129 580 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.75□□□□□ -1.49
COL8A1P27658 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.75□□□□□ -1.49
COL8A1P27658 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.75□□□□□ -1.49
COL8A1P27658 RN7SL610P-201ENST00000463845 291 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 AC103987.1-201ENST00000473394 348 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 AC104563.1-201ENST00000476147 376 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 AC022415.1-202ENST00000486612 523 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 AC022493.2-201ENST00000506122 481 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 AC009901.1-201ENST00000506703 541 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.75□□□□□ -1.49
COL8A1P27658 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.75□□□□□ -1.49
COL8A1P27658 AC114781.3-201ENST00000512083 142 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.75□□□□□ -1.49
COL8A1P27658 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.75□□□□□ -1.49
COL8A1P27658 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.75□□□□□ -1.49
COL8A1P27658 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.75□□□□□ -1.49
COL8A1P27658 AC007225.2-201ENST00000562529 256 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 OR4H6P-201ENST00000563771 921 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL8A1P27658 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.75□□□□□ -1.49
COL8A1P27658 AC090651.1-201ENST00000567865 634 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 AC004805.3-201ENST00000603178 310 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.75□□□□□ -1.49
COL8A1P27658 MIR6748-201ENST00000610433 71 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 U1.41-201ENST00000617626 165 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.75□□□□□ -1.49
COL8A1P27658 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL8A1P27658 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL8A1P27658 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL8A1P27658 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL8A1P27658 AP004289.1-201ENST00000436307 2205 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.75□□□□□ -1.49
COL8A1P27658 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.75□□□□□ -1.49
COL8A1P27658 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
COL8A1P27658 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.75□□□□□ -1.49
COL8A1P27658 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.75□□□□□ -1.49
COL8A1P27658 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL8A1P27658 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.75□□□□□ -1.49
COL8A1P27658 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
COL8A1P27658 RAD17P2-201ENST00000451754 1977 ntBASIC5.75□□□□□ -1.49
COL8A1P27658 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
COL8A1P27658 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL8A1P27658 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.75□□□□□ -1.49
COL8A1P27658 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC5.74□□□□□ -1.49
COL8A1P27658 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.74□□□□□ -1.49
COL8A1P27658 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC5.74□□□□□ -1.49
COL8A1P27658 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC5.74□□□□□ -1.49
COL8A1P27658 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC5.74□□□□□ -1.49
COL8A1P27658 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
COL8A1P27658 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL8A1P27658 RNU6-666P-201ENST00000363499 107 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 Y_RNA.214-201ENST00000364201 112 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
COL8A1P27658 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
COL8A1P27658 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.74□□□□□ -1.49
COL8A1P27658 MRPS6P2-201ENST00000381143 370 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 RNA5SP105-201ENST00000391123 113 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.74□□□□□ -1.49
COL8A1P27658 AC108032.1-201ENST00000416706 207 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.74□□□□□ -1.49
COL8A1P27658 AL121916.1-201ENST00000429405 308 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 AL133396.1-201ENST00000432048 687 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL8A1P27658 AC099799.1-201ENST00000439809 192 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.74□□□□□ -1.49
COL8A1P27658 AC079922.1-201ENST00000443291 359 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 AC243772.1-201ENST00000451620 410 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.74□□□□□ -1.49
COL8A1P27658 SNRPFP3-201ENST00000457792 225 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 RPS3AP41-201ENST00000462701 778 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 AC021074.2-201ENST00000468434 172 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 RPS15AP17-201ENST00000470598 390 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 AC011005.3-201ENST00000491624 395 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.74□□□□□ -1.49
COL8A1P27658 ATP5LP3-201ENST00000514223 304 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 GAPDHP62-201ENST00000515313 990 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 Y_RNA.670-201ENST00000516255 105 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.74□□□□□ -1.49
COL8A1P27658 AC112191.2-201ENST00000522428 333 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.74□□□□□ -1.49
COL8A1P27658 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.74□□□□□ -1.49
COL8A1P27658 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
COL8A1P27658 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.74□□□□□ -1.49
COL8A1P27658 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.74□□□□□ -1.49
COL8A1P27658 MIR1273E-201ENST00000581165 102 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 MIR4775-201ENST00000581168 75 ntBASIC5.74□□□□□ -1.49
COL8A1P27658 MIR3176-201ENST00000582210 90 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms