Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.428-201ENST00000384078 102 ntBASIC6.6□□□□□ -1.35
VARSP26640 RNU6-472P-201ENST00000384299 107 ntBASIC6.6□□□□□ -1.35
VARSP26640 RNU6-713P-201ENST00000384761 107 ntBASIC6.6□□□□□ -1.35
VARSP26640 RNU6-328P-201ENST00000390887 106 ntBASIC6.6□□□□□ -1.35
VARSP26640 RNA5SP176-201ENST00000390956 110 ntBASIC6.6□□□□□ -1.35
VARSP26640 EIF4E2P1-201ENST00000393781 255 ntBASIC6.6□□□□□ -1.35
VARSP26640 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 AC008280.1-201ENST00000418851 412 ntBASIC6.6□□□□□ -1.35
VARSP26640 RPL23AP50-201ENST00000434149 455 ntBASIC6.6□□□□□ -1.35
VARSP26640 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.6□□□□□ -1.35
VARSP26640 AL031681.1-201ENST00000443304 400 ntBASIC6.6□□□□□ -1.35
VARSP26640 AC011225.1-201ENST00000457751 369 ntBASIC6.6□□□□□ -1.35
VARSP26640 RPS26P11-201ENST00000463445 348 ntBASIC6.6□□□□□ -1.35
VARSP26640 AL355032.1-201ENST00000472981 438 ntBASIC6.6□□□□□ -1.35
VARSP26640 RPS26P6-201ENST00000475156 348 ntBASIC6.6□□□□□ -1.35
VARSP26640 RN7SL187P-201ENST00000495587 303 ntBASIC6.6□□□□□ -1.35
VARSP26640 AC008526.1-201ENST00000509149 338 ntBASIC6.6□□□□□ -1.35
VARSP26640 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC6.6□□□□□ -1.35
VARSP26640 IGHV3-57-201ENST00000520143 280 ntBASIC6.6□□□□□ -1.35
VARSP26640 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.6□□□□□ -1.35
VARSP26640 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC6.6□□□□□ -1.35
VARSP26640 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.6□□□□□ -1.35
VARSP26640 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.6□□□□□ -1.35
VARSP26640 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.6□□□□□ -1.35
VARSP26640 AC011477.5-201ENST00000586571 259 ntBASIC6.6□□□□□ -1.35
VARSP26640 RPL7AP69-201ENST00000595306 806 ntBASIC6.6□□□□□ -1.35
VARSP26640 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.6□□□□□ -1.35
VARSP26640 AC092447.9-201ENST00000603395 144 ntBASIC6.6□□□□□ -1.35
VARSP26640 AC009229.3-201ENST00000608056 282 ntBASIC6.6□□□□□ -1.35
VARSP26640 AC015819.1-201ENST00000613588 663 ntBASIC6.6□□□□□ -1.35
VARSP26640 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.6□□□□□ -1.35
VARSP26640 AC211486.4-201ENST00000621495 113 ntBASIC6.6□□□□□ -1.35
VARSP26640 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.6□□□□□ -1.35
VARSP26640 AP000550.3-201ENST00000637734 379 ntBASIC6.6□□□□□ -1.35
VARSP26640 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.6□□□□□ -1.35
VARSP26640 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 AC027575.3-201ENST00000583058 2747 ntBASIC6.6□□□□□ -1.35
VARSP26640 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 ZNF734P-201ENST00000419494 1534 ntBASIC6.6□□□□□ -1.35
VARSP26640 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.59□□□□□ -1.35
VARSP26640 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VARSP26640 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
VARSP26640 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.59□□□□□ -1.35
VARSP26640 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.59□□□□□ -1.35
VARSP26640 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VARSP26640 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.59□□□□□ -1.35
VARSP26640 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VARSP26640 AC011455.2-201ENST00000599320 3336 ntBASIC6.59□□□□□ -1.35
VARSP26640 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
VARSP26640 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.59□□□□□ -1.35
VARSP26640 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.59□□□□□ -1.35
VARSP26640 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.59□□□□□ -1.35
VARSP26640 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
VARSP26640 RPL24P4-201ENST00000326586 421 ntBASIC6.59□□□□□ -1.35
VARSP26640 Y_RNA.404-201ENST00000383978 102 ntBASIC6.59□□□□□ -1.35
VARSP26640 Y_RNA.485-201ENST00000384395 102 ntBASIC6.59□□□□□ -1.35
VARSP26640 AL109755.1-201ENST00000401791 649 ntBASIC6.59□□□□□ -1.35
VARSP26640 AL078604.1-201ENST00000404609 466 ntBASIC6.59□□□□□ -1.35
VARSP26640 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
VARSP26640 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.59□□□□□ -1.35
VARSP26640 POLHP1-201ENST00000411806 470 ntBASIC6.59□□□□□ -1.35
VARSP26640 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.59□□□□□ -1.35
VARSP26640 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.59□□□□□ -1.35
VARSP26640 AC083862.1-201ENST00000427378 1242 ntBASIC6.59□□□□□ -1.35
VARSP26640 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.59□□□□□ -1.35
VARSP26640 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.59□□□□□ -1.35
VARSP26640 RPL23AP89-201ENST00000439324 255 ntBASIC6.59□□□□□ -1.35
VARSP26640 RPL12P49-201ENST00000441100 121 ntBASIC6.59□□□□□ -1.35
VARSP26640 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.59□□□□□ -1.35
VARSP26640 MED28P3-201ENST00000444288 531 ntBASIC6.59□□□□□ -1.35
VARSP26640 AL354714.5-201ENST00000450131 590 ntBASIC6.59□□□□□ -1.35
VARSP26640 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.59□□□□□ -1.35
VARSP26640 RN7SL655P-201ENST00000486087 298 ntBASIC6.59□□□□□ -1.35
VARSP26640 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.59□□□□□ -1.35
VARSP26640 AC012400.1-201ENST00000518452 381 ntBASIC6.59□□□□□ -1.35
VARSP26640 AC131281.1-201ENST00000522984 164 ntBASIC6.59□□□□□ -1.35
VARSP26640 AC011979.2-201ENST00000527568 352 ntBASIC6.59□□□□□ -1.35
VARSP26640 OR52K3P-201ENST00000531655 943 ntBASIC6.59□□□□□ -1.35
VARSP26640 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
VARSP26640 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
VARSP26640 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.59□□□□□ -1.35
VARSP26640 AP005119.1-201ENST00000580956 292 ntBASIC6.59□□□□□ -1.35
VARSP26640 AC060771.1-201ENST00000582031 164 ntBASIC6.59□□□□□ -1.35
VARSP26640 AL355297.3-201ENST00000604082 446 ntBASIC6.59□□□□□ -1.35
VARSP26640 AC104695.2-201ENST00000605056 775 ntBASIC6.59□□□□□ -1.35
VARSP26640 RPL12P48-201ENST00000605620 304 ntBASIC6.59□□□□□ -1.35
VARSP26640 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.59□□□□□ -1.35
VARSP26640 AL359091.2-201ENST00000609303 556 ntBASIC6.59□□□□□ -1.35
VARSP26640 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.59□□□□□ -1.35
VARSP26640 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
VARSP26640 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms