Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.04□□□□□ -1.92
COL8A2P25067 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.04□□□□□ -1.92
COL8A2P25067 AC009313.2-201ENST00000417893 1941 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL8A2P25067 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
COL8A2P25067 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL8A2P25067 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL8A2P25067 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL8A2P25067 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL8A2P25067 RNU1-87P-201ENST00000363727 170 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.04□□□□□ -1.92
COL8A2P25067 RNU6-891P-201ENST00000384280 111 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 MIR183-201ENST00000384958 110 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 RHEBP3-201ENST00000411920 351 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.04□□□□□ -1.92
COL8A2P25067 AC245052.5-201ENST00000416320 649 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.04□□□□□ -1.92
COL8A2P25067 DBIP2-201ENST00000419076 262 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.04□□□□□ -1.92
COL8A2P25067 DNAJC19P1-201ENST00000455312 319 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 AP000926.1-201ENST00000479573 241 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.04□□□□□ -1.92
COL8A2P25067 AC098799.1-201ENST00000504752 800 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 HAUS1P1-201ENST00000505275 832 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.04□□□□□ -1.92
COL8A2P25067 SNORA70.17-201ENST00000516449 133 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.04□□□□□ -1.92
COL8A2P25067 RANP9-201ENST00000519957 271 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.04□□□□□ -1.92
COL8A2P25067 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.04□□□□□ -1.92
COL8A2P25067 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL8A2P25067 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.04□□□□□ -1.92
COL8A2P25067 AC012468.1-201ENST00000604888 430 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 BNIP3P7-201ENST00000605641 516 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 AC034236.3-201ENST00000605999 461 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 AC084757.4-201ENST00000616350 526 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 AL133370.2-201ENST00000619934 439 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.04□□□□□ -1.92
COL8A2P25067 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL8A2P25067 HSPA8P1-201ENST00000425843 1833 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 BX005019.1-201ENST00000561881 1810 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL8A2P25067 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL8A2P25067 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL8A2P25067 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
COL8A2P25067 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.03□□□□□ -1.92
COL8A2P25067 EXOC5P1-201ENST00000510543 1969 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
COL8A2P25067 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL8A2P25067 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL8A2P25067 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL8A2P25067 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL8A2P25067 NPM1P10-201ENST00000398310 865 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.03□□□□□ -1.92
COL8A2P25067 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.03□□□□□ -1.92
COL8A2P25067 CYCSP43-201ENST00000438233 310 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 ELOCP10-201ENST00000440624 327 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 RAD1P2-201ENST00000446414 663 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 CCRL1P1-201ENST00000449542 1053 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.03□□□□□ -1.92
COL8A2P25067 AC099563.1-201ENST00000456086 418 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.03□□□□□ -1.92
COL8A2P25067 RPL23AP12-201ENST00000467573 473 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 AC021205.1-201ENST00000468797 348 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.03□□□□□ -1.92
COL8A2P25067 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.03□□□□□ -1.92
COL8A2P25067 SNORA70.14-201ENST00000516205 110 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 RN7SKP209-201ENST00000516888 304 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 NARSP2-201ENST00000518524 679 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.03□□□□□ -1.92
COL8A2P25067 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.03□□□□□ -1.92
COL8A2P25067 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.03□□□□□ -1.92
COL8A2P25067 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.03□□□□□ -1.92
COL8A2P25067 AC007458.1-201ENST00000542812 373 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.03□□□□□ -1.92
COL8A2P25067 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.03□□□□□ -1.92
COL8A2P25067 AC084373.1-201ENST00000603311 235 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 SRGNP1-201ENST00000603392 451 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 ELOCP35-201ENST00000604289 336 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 ELOCP34-201ENST00000604436 327 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 AC006077.1-201ENST00000604746 343 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 AC069209.1-201ENST00000619282 651 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 U4.6-201ENST00000621618 127 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 U6.105-201ENST00000637379 88 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 CR381670.1-201ENST00000624291 1693 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 AC007656.2-201ENST00000624902 4547 ntBASIC3.03□□□□□ -1.92
COL8A2P25067 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL8A2P25067 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL8A2P25067 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL8A2P25067 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL8A2P25067 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.03□□□□□ -1.92
COL8A2P25067 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL8A2P25067 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
COL8A2P25067 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
COL8A2P25067 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL8A2P25067 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL8A2P25067 SAGE2P-201ENST00000420011 2126 ntBASIC3.02□□□□□ -1.93
COL8A2P25067 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL8A2P25067 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms