Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 RNA5SP513-201ENST00000364648 118 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 RNU6-444P-201ENST00000383988 108 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 MTND4P22-201ENST00000413116 1169 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC008280.1-201ENST00000418851 412 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC002542.1-201ENST00000440683 193 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 MOB1AP2-201ENST00000446060 614 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 NUTF2P3-201ENST00000448540 384 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 RPL32P14-201ENST00000463196 378 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC008379.1-201ENST00000463655 464 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC105137.1-201ENST00000484355 562 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC093267.1-201ENST00000489176 961 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 RPS27AP13-201ENST00000498403 237 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC008628.1-201ENST00000508663 265 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC005798.1-201ENST00000513715 387 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 RNU2-58P-201ENST00000516403 183 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 MRPL49P2-201ENST00000521066 465 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AP003730.1-201ENST00000524605 285 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 OR4R3P-201ENST00000525084 838 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AGGF1P8-201ENST00000562979 1000 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC124283.4-201ENST00000581815 456 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 OR4G1P-201ENST00000588632 938 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC006116.5-201ENST00000591936 559 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AC023043.4-201ENST00000612081 449 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 U73479.1-201ENST00000618062 168 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 AL731566.2-201ENST00000618971 317 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DPA1P20036 SEPT7P7-201ENST00000420492 1301 ntBASIC4.17□□□□□ -1.74
HLA-DPA1P20036 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 FABP12P1-201ENST00000401911 322 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AL121834.1-202ENST00000404494 277 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 PGBD4P8-201ENST00000412993 562 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 RPL31P2-201ENST00000413849 377 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 RSL24D1P6-201ENST00000426934 401 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC069285.2-201ENST00000440210 275 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC006011.1-201ENST00000442758 349 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 RPL7P1-201ENST00000468161 747 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 RPL7P9-201ENST00000468715 747 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 RPL29P14-201ENST00000495837 428 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC078918.1-201ENST00000498515 228 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC093824.1-201ENST00000508796 343 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC005921.1-201ENST00000510589 286 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 SNORA31.9-201ENST00000516429 84 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AP004242.1-201ENST00000533701 349 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC136624.4-201ENST00000573044 370 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC022069.1-201ENST00000582910 658 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC112230.1-201ENST00000604342 547 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 HSPE1P14-201ENST00000605812 302 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC018754.1-201ENST00000607486 925 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC016542.1-201ENST00000608259 493 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC009237.17-201ENST00000618111 748 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AL445567.2-201ENST00000618935 498 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AL356121.2-201ENST00000624715 780 ntBASIC4.16□□□□□ -1.74
HLA-DPA1P20036 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
HLA-DPA1P20036 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
HLA-DPA1P20036 AP001486.2-201ENST00000561652 5113 ntBASIC4.15□□□□□ -1.74
HLA-DPA1P20036 AL157700.1-201ENST00000561973 1432 ntBASIC4.15□□□□□ -1.74
HLA-DPA1P20036 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DPA1P20036 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 SNORA60-201ENST00000362396 134 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms