Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 LARP1BP1-201ENST00000506036 1359 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL3P19876 MTND4P31-201ENST00000425607 1343 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CXCL3P19876 AC007496.3-201ENST00000624987 3443 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CXCL3P19876 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL3P19876 RNU4-39P-201ENST00000362455 127 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 RNU6-891P-201ENST00000384280 111 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CXCL3P19876 HNRNPDP2-201ENST00000406475 478 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 AL583834.1-201ENST00000406943 343 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.03□□□□□ -1.92
CXCL3P19876 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.03□□□□□ -1.92
CXCL3P19876 MTND4P22-201ENST00000413116 1169 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 AC004987.3-201ENST00000413879 771 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 AC068533.1-201ENST00000418542 415 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.03□□□□□ -1.92
CXCL3P19876 AC012498.1-201ENST00000424037 437 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.03□□□□□ -1.92
CXCL3P19876 AL121578.1-201ENST00000428051 892 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 AL160175.1-201ENST00000428124 247 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 MRPL50P1-201ENST00000431951 384 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL3P19876 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.03□□□□□ -1.92
CXCL3P19876 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
CXCL3P19876 RPS20P21-201ENST00000466859 343 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.03□□□□□ -1.92
CXCL3P19876 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.03□□□□□ -1.92
CXCL3P19876 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CXCL3P19876 AP002812.4-201ENST00000532139 286 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
CXCL3P19876 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL3P19876 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.03□□□□□ -1.92
CXCL3P19876 MIR5096-201ENST00000583713 70 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 IPO5P1-202ENST00000600039 287 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 AC069304.3-201ENST00000603938 1084 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 AC012557.1-201ENST00000607115 611 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 AL354760.1-201ENST00000608357 643 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 AC114781.5-201ENST00000615297 108 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 MIR8059-201ENST00000620427 81 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 MIR3653-201ENST00000625572 110 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL3P19876 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL3P19876 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.03□□□□□ -1.92
CXCL3P19876 AC007823.1-201ENST00000569932 1566 ntBASIC3.03□□□□□ -1.92
CXCL3P19876 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL3P19876 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CXCL3P19876 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CXCL3P19876 MTND5P3-201ENST00000438536 1800 ntBASIC3.03□□□□□ -1.93
CXCL3P19876 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CXCL3P19876 SEPT7P7-201ENST00000420492 1301 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL3P19876 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CXCL3P19876 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CXCL3P19876 RNA5SP383-201ENST00000362934 120 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 U3.22-201ENST00000391120 215 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 HSPE1P26-201ENST00000405341 275 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
CXCL3P19876 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.02□□□□□ -1.93
CXCL3P19876 HMGB3P23-201ENST00000414981 585 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL3P19876 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.02□□□□□ -1.93
CXCL3P19876 RPL23AP38-201ENST00000423801 469 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.02□□□□□ -1.93
CXCL3P19876 AC068287.1-201ENST00000430283 295 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 CYCSP43-201ENST00000438233 310 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 AL645931.1-201ENST00000439737 410 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 ARL5AP2-201ENST00000444698 533 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 RPL34P26-201ENST00000445636 354 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.02□□□□□ -1.93
CXCL3P19876 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.02□□□□□ -1.93
CXCL3P19876 SNRPGP3-201ENST00000469405 227 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 UQCRHP4-201ENST00000471686 272 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL3P19876 AC091167.1-201ENST00000492017 396 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 RPS27AP13-201ENST00000498403 237 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.02□□□□□ -1.93
CXCL3P19876 PTGES3P3-201ENST00000511479 482 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 RNU2-58P-201ENST00000516403 183 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL3P19876 OR4V1P-201ENST00000525394 1140 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.02□□□□□ -1.93
CXCL3P19876 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.02□□□□□ -1.93
CXCL3P19876 AC026333.2-201ENST00000542164 106 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL3P19876 AL121766.1-201ENST00000547436 487 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 AC023161.2-201ENST00000551218 780 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.02□□□□□ -1.93
CXCL3P19876 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL3P19876 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL3P19876 AC006116.5-201ENST00000591936 559 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.02□□□□□ -1.93
CXCL3P19876 MIR6864-201ENST00000617935 70 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 AC073342.3-201ENST00000624211 193 ntBASIC3.02□□□□□ -1.93
CXCL3P19876 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL3P19876 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CXCL3P19876 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.01□□□□□ -1.93
CXCL3P19876 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.01□□□□□ -1.93
CXCL3P19876 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms