Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 AL445264.1-201ENST00000621719 171 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 AC004009.2-201ENST00000623016 728 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.39□□□□□ -1.39
ERCC3P19447 FAM157B-203ENST00000639350 358 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.39□□□□□ -1.39
ERCC3P19447 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 AC018809.2-201ENST00000602436 3823 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 SMG1P6-201ENST00000532337 2930 ntBASIC6.39□□□□□ -1.39
ERCC3P19447 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
ERCC3P19447 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
ERCC3P19447 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC3P19447 AC005005.4-201ENST00000623789 16698 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
ERCC3P19447 U3.2-201ENST00000362981 210 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 RNA5SP187-201ENST00000384400 119 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 MIR765-201ENST00000390226 114 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 Y_RNA.608-201ENST00000410647 95 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.38□□□□□ -1.39
ERCC3P19447 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC3P19447 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.38□□□□□ -1.39
ERCC3P19447 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.38□□□□□ -1.39
ERCC3P19447 BX276092.6-201ENST00000430476 250 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC3P19447 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC3P19447 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.38□□□□□ -1.39
ERCC3P19447 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC3P19447 ARPC3P1-201ENST00000437218 533 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC3P19447 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC3P19447 AL035090.1-201ENST00000454835 332 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 BX276092.8-201ENST00000455722 250 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.38□□□□□ -1.39
ERCC3P19447 AC034222.1-201ENST00000494052 532 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC3P19447 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC3P19447 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC3P19447 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC3P19447 AC022790.1-201ENST00000522872 204 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC6.38□□□□□ -1.39
ERCC3P19447 AC006960.3-201ENST00000561845 705 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AL157394.1-201ENST00000562983 1224 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.38□□□□□ -1.39
ERCC3P19447 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.38□□□□□ -1.39
ERCC3P19447 AC007566.2-201ENST00000603642 413 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AC126915.2-201ENST00000610957 190 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AC090970.3-201ENST00000612566 866 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.38□□□□□ -1.39
ERCC3P19447 AC068870.2-201ENST00000620635 389 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AP002505.2-201ENST00000623585 696 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.38□□□□□ -1.39
ERCC3P19447 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.38□□□□□ -1.39
ERCC3P19447 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC3P19447 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC3P19447 ERCC6-202ENST00000374127 1782 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.38□□□□□ -1.39
ERCC3P19447 AL451142.2-201ENST00000429076 2090 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AC007938.2-201ENST00000604666 2634 ntBASIC6.38□□□□□ -1.39
ERCC3P19447 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.38□□□□□ -1.39
ERCC3P19447 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC3P19447 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ERCC3P19447 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.38□□□□□ -1.39
ERCC3P19447 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC3P19447 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC3P19447 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC3P19447 AC004076.2-201ENST00000620532 3323 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
ERCC3P19447 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC3P19447 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC3P19447 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.37□□□□□ -1.39
ERCC3P19447 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ERCC3P19447 CASC19-221ENST00000641309 1382 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ERCC3P19447 AL161781.1-201ENST00000354277 403 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.37□□□□□ -1.39
ERCC3P19447 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
ERCC3P19447 RNU6-343P-201ENST00000364709 104 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 RNU6-878P-201ENST00000384578 110 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 AL356421.1-201ENST00000403255 413 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 RN7SKP125-201ENST00000410481 302 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 AL133482.1-201ENST00000415988 498 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 BX295541.1-201ENST00000417774 250 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 PSMA6P3-201ENST00000428242 164 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 MRPS10P2-201ENST00000431226 381 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.37□□□□□ -1.39
ERCC3P19447 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC6.37□□□□□ -1.39
ERCC3P19447 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.37□□□□□ -1.39
ERCC3P19447 AC105399.1-202ENST00000447303 205 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.37□□□□□ -1.39
ERCC3P19447 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.37□□□□□ -1.39
ERCC3P19447 MEMO1P4-201ENST00000453590 386 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.37□□□□□ -1.39
ERCC3P19447 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.37□□□□□ -1.39
ERCC3P19447 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms