Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RNY3P3-201ENST00000363816 102 ntBASIC5.29□□□□□ -1.56
ATF4P18848 Y_RNA.381-201ENST00000365666 102 ntBASIC5.29□□□□□ -1.56
ATF4P18848 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 RNU6-74P-201ENST00000384235 107 ntBASIC5.29□□□□□ -1.56
ATF4P18848 MIR558-201ENST00000384920 94 ntBASIC5.29□□□□□ -1.56
ATF4P18848 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ATF4P18848 RNU6-1158P-201ENST00000391167 107 ntBASIC5.29□□□□□ -1.56
ATF4P18848 RNU4-34P-201ENST00000410431 124 ntBASIC5.29□□□□□ -1.56
ATF4P18848 RN7SKP161-201ENST00000411110 305 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AL662791.3-201ENST00000413771 776 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.29□□□□□ -1.56
ATF4P18848 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 MICG-208ENST00000416822 132 ntBASIC5.29□□□□□ -1.56
ATF4P18848 MED13P1-201ENST00000428342 171 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AC245452.2-201ENST00000435222 392 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AL121601.2-201ENST00000438019 707 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AC016691.1-201ENST00000441321 413 ntBASIC5.29□□□□□ -1.56
ATF4P18848 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 AC006480.1-201ENST00000449887 378 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF4P18848 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF4P18848 RPS29P25-201ENST00000481709 171 ntBASIC5.29□□□□□ -1.56
ATF4P18848 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AC108475.1-201ENST00000507880 950 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.29□□□□□ -1.56
ATF4P18848 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF4P18848 AC046134.1-201ENST00000514454 666 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AC026801.2-201ENST00000515352 425 ntBASIC5.29□□□□□ -1.56
ATF4P18848 RNU6-1095P-201ENST00000516148 108 ntBASIC5.29□□□□□ -1.56
ATF4P18848 SNORA40.12-201ENST00000516329 111 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AC078899.1-201ENST00000521432 1185 ntBASIC5.29□□□□□ -1.56
ATF4P18848 FAM60DP-201ENST00000524174 632 ntBASIC5.29□□□□□ -1.56
ATF4P18848 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.29□□□□□ -1.56
ATF4P18848 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF4P18848 PHBP2-201ENST00000532859 806 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF4P18848 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF4P18848 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 HIF1AP1-201ENST00000553642 175 ntBASIC5.29□□□□□ -1.56
ATF4P18848 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.29□□□□□ -1.56
ATF4P18848 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF4P18848 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.29□□□□□ -1.56
ATF4P18848 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF4P18848 HMGB3P26-201ENST00000560051 582 ntBASIC5.29□□□□□ -1.56
ATF4P18848 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC5.29□□□□□ -1.56
ATF4P18848 AC090651.1-201ENST00000567865 634 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC5.29□□□□□ -1.56
ATF4P18848 OR4K8P-201ENST00000578842 1048 ntBASIC5.29□□□□□ -1.56
ATF4P18848 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF4P18848 AC091135.1-201ENST00000585943 307 ntBASIC5.29□□□□□ -1.56
ATF4P18848 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.29□□□□□ -1.56
ATF4P18848 COX6CP7-201ENST00000597056 208 ntBASIC5.29□□□□□ -1.56
ATF4P18848 LARP7P1-201ENST00000605576 316 ntBASIC5.29□□□□□ -1.56
ATF4P18848 RNA5SP108-201ENST00000605921 117 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.29□□□□□ -1.56
ATF4P18848 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC5.29□□□□□ -1.56
ATF4P18848 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.29□□□□□ -1.56
ATF4P18848 AL136295.6-201ENST00000610486 658 ntBASIC5.29□□□□□ -1.56
ATF4P18848 DISC2.1-201ENST00000612827 205 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AC130324.3-201ENST00000614165 542 ntBASIC5.29□□□□□ -1.56
ATF4P18848 MIR6130-201ENST00000619419 109 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AL138693.1-201ENST00000622219 129 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AC007347.2-201ENST00000623044 180 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AP003122.6-201ENST00000623831 495 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AP005264.7-201ENST00000625003 745 ntBASIC5.29□□□□□ -1.56
ATF4P18848 LINC02495-203ENST00000636704 242 ntBASIC5.29□□□□□ -1.56
ATF4P18848 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ATF4P18848 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ATF4P18848 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.29□□□□□ -1.56
ATF4P18848 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 AP001029.2-203ENST00000589795 4910 ntBASIC5.29□□□□□ -1.56
ATF4P18848 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.28□□□□□ -1.56
ATF4P18848 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.28□□□□□ -1.56
ATF4P18848 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATF4P18848 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATF4P18848 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATF4P18848 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ATF4P18848 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.28□□□□□ -1.56
ATF4P18848 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.28□□□□□ -1.56
ATF4P18848 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
ATF4P18848 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
ATF4P18848 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ATF4P18848 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATF4P18848 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATF4P18848 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATF4P18848 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATF4P18848 Y_RNA.160-201ENST00000363677 92 ntBASIC5.28□□□□□ -1.56
ATF4P18848 RN7SKP47-201ENST00000365347 328 ntBASIC5.28□□□□□ -1.56
ATF4P18848 RNU6-712P-201ENST00000410558 100 ntBASIC5.28□□□□□ -1.56
ATF4P18848 RN7SKP159-201ENST00000410657 292 ntBASIC5.28□□□□□ -1.56
ATF4P18848 RNA5SP107-201ENST00000411358 122 ntBASIC5.28□□□□□ -1.56
ATF4P18848 SNRPFP1-201ENST00000414761 252 ntBASIC5.28□□□□□ -1.56
ATF4P18848 OR51A5P-201ENST00000415429 942 ntBASIC5.28□□□□□ -1.56
ATF4P18848 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.28□□□□□ -1.56
ATF4P18848 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms