Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTLA4P16410 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTLA4P16410 SNORD9-201ENST00000362566 104 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 RNU6-891P-201ENST00000384280 111 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 MIR124-3-201ENST00000384866 87 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 SNORA57.1-201ENST00000391227 145 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 AL138878.1-201ENST00000405131 347 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 Z98941.1-201ENST00000407764 100 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 MIR1193-201ENST00000408109 78 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 MIR1183-201ENST00000408856 89 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 RN7SKP53-201ENST00000411337 315 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 ATP5A1P2-201ENST00000412323 255 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.14□□□□□ -1.91
CTLA4P16410 AC068533.1-201ENST00000418542 415 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTLA4P16410 HMGB3P5-201ENST00000428894 612 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CTLA4P16410 VN1R48P-201ENST00000448149 1036 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 RPS3AP46-201ENST00000448352 682 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.14□□□□□ -1.91
CTLA4P16410 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.14□□□□□ -1.91
CTLA4P16410 SNORD108-201ENST00000459332 71 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 AC007688.1-201ENST00000475592 759 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 AL161747.1-201ENST00000480068 358 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.14□□□□□ -1.91
CTLA4P16410 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.14□□□□□ -1.91
CTLA4P16410 Vault.1-201ENST00000516474 102 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 SNORA70.18-201ENST00000516696 98 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.14□□□□□ -1.91
CTLA4P16410 AC008676.3-201ENST00000521237 435 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTLA4P16410 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.14□□□□□ -1.91
CTLA4P16410 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.14□□□□□ -1.91
CTLA4P16410 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.14□□□□□ -1.91
CTLA4P16410 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.14□□□□□ -1.91
CTLA4P16410 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.14□□□□□ -1.91
CTLA4P16410 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.14□□□□□ -1.91
CTLA4P16410 AC009101.1-201ENST00000568135 242 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTLA4P16410 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.14□□□□□ -1.91
CTLA4P16410 Z82195.1-201ENST00000604558 398 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 AL355816.1-201ENST00000607951 118 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.14□□□□□ -1.91
CTLA4P16410 OTUD4P1-201ENST00000237841 3067 ntBASIC3.14□□□□□ -1.91
CTLA4P16410 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTLA4P16410 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTLA4P16410 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.13□□□□□ -1.91
CTLA4P16410 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTLA4P16410 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTLA4P16410 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
CTLA4P16410 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTLA4P16410 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTLA4P16410 AC017079.2-201ENST00000416102 485 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 DBIP2-201ENST00000419076 262 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 AC092832.1-201ENST00000422934 400 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTLA4P16410 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.13□□□□□ -1.91
CTLA4P16410 USP9YP7-201ENST00000436723 430 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.13□□□□□ -1.91
CTLA4P16410 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.13□□□□□ -1.91
CTLA4P16410 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.13□□□□□ -1.91
CTLA4P16410 MRPS31P2-201ENST00000451581 518 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 USP9YP32-201ENST00000452432 430 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTLA4P16410 AP000873.1-201ENST00000463987 400 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 AC023598.1-201ENST00000472521 361 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.13□□□□□ -1.91
CTLA4P16410 AC012170.1-201ENST00000495139 359 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 SETP14-201ENST00000497538 873 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 HMGB1P21-201ENST00000502313 581 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.13□□□□□ -1.91
CTLA4P16410 OR5H4P-201ENST00000510851 923 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 AC034244.2-201ENST00000514668 858 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.13□□□□□ -1.91
CTLA4P16410 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.13□□□□□ -1.91
CTLA4P16410 OR4U1P-201ENST00000554958 912 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 AC106785.3-201ENST00000564064 847 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.13□□□□□ -1.91
CTLA4P16410 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.13□□□□□ -1.91
CTLA4P16410 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.13□□□□□ -1.91
CTLA4P16410 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.13□□□□□ -1.91
CTLA4P16410 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.13□□□□□ -1.91
CTLA4P16410 AL391497.1-201ENST00000608671 547 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 AL357559.1-201ENST00000622228 274 ntBASIC3.13□□□□□ -1.91
CTLA4P16410 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.13□□□□□ -1.91
CTLA4P16410 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTLA4P16410 MTND4P10-201ENST00000446199 1363 ntBASIC3.12□□□□□ -1.91
CTLA4P16410 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTLA4P16410 AC090337.1-201ENST00000579651 2074 ntBASIC3.12□□□□□ -1.91
CTLA4P16410 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTLA4P16410 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTLA4P16410 FRG1CP-201ENST00000358464 769 ntBASIC3.12□□□□□ -1.91
CTLA4P16410 AL590704.1-201ENST00000402856 794 ntBASIC3.12□□□□□ -1.91
CTLA4P16410 HMGB3P18-201ENST00000406327 590 ntBASIC3.12□□□□□ -1.91
CTLA4P16410 RNA5SP498-201ENST00000411342 120 ntBASIC3.12□□□□□ -1.91
CTLA4P16410 AL035423.1-201ENST00000420331 213 ntBASIC3.12□□□□□ -1.91
CTLA4P16410 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.12□□□□□ -1.91
CTLA4P16410 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.12□□□□□ -1.91
CTLA4P16410 NOTCH2P1-201ENST00000443481 624 ntBASIC3.12□□□□□ -1.91
CTLA4P16410 AL357552.1-201ENST00000445254 415 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms