Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 C4BPAP1-201ENST00000415474 1893 ntBASIC6.28□□□□□ -1.4
HOXD8P13378 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.28□□□□□ -1.4
HOXD8P13378 AC007938.2-201ENST00000604666 2634 ntBASIC6.28□□□□□ -1.4
HOXD8P13378 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXD8P13378 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.27□□□□□ -1.4
HOXD8P13378 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXD8P13378 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 RNU6-1120P-201ENST00000362988 108 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 RNU6-251P-201ENST00000363235 104 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 SNORA4.3-201ENST00000365564 137 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 RN7SKP279-201ENST00000411383 298 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.27□□□□□ -1.41
HOXD8P13378 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXD8P13378 AL031663.1-201ENST00000437445 219 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXD8P13378 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXD8P13378 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXD8P13378 AC005532.2-201ENST00000467154 373 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 RPL23AP12-201ENST00000467573 473 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXD8P13378 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXD8P13378 RN7SL30P-201ENST00000488416 306 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 PGAM1P13-201ENST00000507497 754 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXD8P13378 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXD8P13378 RN7SKP13-201ENST00000515933 244 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXD8P13378 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXD8P13378 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXD8P13378 TRMT10BP1-201ENST00000519377 943 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXD8P13378 AC107953.1-201ENST00000522216 297 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.27□□□□□ -1.41
HOXD8P13378 OR5M2P-201ENST00000529003 936 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXD8P13378 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXD8P13378 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXD8P13378 RNU6-84P-201ENST00000607737 102 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXD8P13378 AC104237.2-201ENST00000612456 443 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 AC009161.2-201ENST00000624626 138 ntBASIC6.27□□□□□ -1.41
HOXD8P13378 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXD8P13378 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXD8P13378 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HOXD8P13378 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
HOXD8P13378 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXD8P13378 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
HOXD8P13378 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXD8P13378 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXD8P13378 ERCC6-202ENST00000374127 1782 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 SNX18P3-202ENST00000565670 1750 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXD8P13378 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXD8P13378 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXD8P13378 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXD8P13378 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXD8P13378 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXD8P13378 Y_RNA.46-201ENST00000362695 102 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 SNORA63C-201ENST00000364578 129 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 SNORA20.2-201ENST00000383922 131 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 RNU6-74P-201ENST00000384235 107 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 Y_RNA.459-201ENST00000384251 102 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 RNU6-1160P-201ENST00000384546 104 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 RNA5SP91-201ENST00000390902 119 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 RPL7P25-201ENST00000404151 721 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXD8P13378 SLC35E1P1-201ENST00000419313 864 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXD8P13378 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXD8P13378 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXD8P13378 RPL36AP53-201ENST00000432891 316 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 AC119618.1-201ENST00000434191 222 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXD8P13378 RSU1P2-202ENST00000437884 485 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 TRAPPC2P8-201ENST00000440676 396 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 AC016691.1-201ENST00000441321 413 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 Z80107.2-201ENST00000445127 392 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 RPL7P6-201ENST00000480903 738 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 RPS21P4-201ENST00000487122 248 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 RPL32P9-201ENST00000487963 407 ntBASIC6.26□□□□□ -1.41
HOXD8P13378 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXD8P13378 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXD8P13378 GAPDHP56-201ENST00000506031 988 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms